Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00068 ATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTGCTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGAAATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGCAGCCATGACACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGCCCCAGCTCCGGCATACTTTGGTGTTTTAAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGCCCTCATCTTTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1305 0.4475 MQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNAPAPAYFGVLNNGSNPFGSSREPSSLNHTTYRCPQPQGIGRILTGP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00068 434 MobiDBLite consensus disorder prediction 197 225 - -
Pral960g00068 434 SUPERFAMILY WRKY DNA-binding domain 247 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 SUPERFAMILY WRKY DNA-binding domain 80 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 ProSiteProfiles WRKY domain profile. 77 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 MobiDBLite consensus disorder prediction 311 339 - -
Pral960g00068 434 MobiDBLite consensus disorder prediction 209 225 - -
Pral960g00068 434 FunFam WRKY transcription factor 33 242 308 - -
Pral960g00068 434 FunFam WRKY transcription factor 70 142 - -
Pral960g00068 434 ProSiteProfiles WRKY domain profile. 250 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 SMART WRKY_cls 82 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 SMART WRKY_cls 255 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 Pfam WRKY DNA -binding domain 83 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 Pfam WRKY DNA -binding domain 256 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 Gene3D WRKY domain 240 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 Gene3D WRKY domain 70 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00068 434 MobiDBLite consensus disorder prediction 1 30 - -
Pral960g00068 434 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 350 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00068 Pral-Chr960 407593 411500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00068 26 434 WRKY Transcription Factor Family AT4G26640 58.255 1.98e-155 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral960g00068 WRKY 9.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00068 - - gmx:100781491 655.21