Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral960g00067 | ATGGACGCCGCTATCAACTCCGCCGAGGCTCGCTCAGCTTCGGAGCTCCGGCTCCGCCAGGTCTCTTCCTCCGATCCGACTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCGCCTGGCCTTAGTCCCTCGTCGTTTCTTGACTCCCCCGTGCTTCTCTCCAACGTCAAGGCTCTCACAGATTTCAACAGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTGCTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGAAATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGCAGCCATGACACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGCCCCAGCTCCGGCATACTTTGGTGTTTTAAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGCCCTCATCTTTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA | 1569 | 0.4678 | MDAAINSAEARSASELRLRQVSSSDPTQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLDSPVLLSNVKALTDFNSHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNAPAPAYFGVLNNGSNPFGSSREPSSLNHTTYRCPQPQGIGRILTGP | 522 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral960g00067 | 522 | FunFam | WRKY transcription factor | 158 | 230 | - | - | |
Pral960g00067 | 522 | MobiDBLite | consensus disorder prediction | 84 | 107 | - | - | |
Pral960g00067 | 522 | SMART | WRKY_cls | 170 | 228 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | SMART | WRKY_cls | 343 | 402 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | MobiDBLite | consensus disorder prediction | 285 | 313 | - | - | |
Pral960g00067 | 522 | SUPERFAMILY | WRKY DNA-binding domain | 168 | 229 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | ProSiteProfiles | WRKY domain profile. | 338 | 403 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | FunFam | WRKY transcription factor 33 | 330 | 396 | - | - | |
Pral960g00067 | 522 | Gene3D | WRKY domain | 158 | 230 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | Gene3D | WRKY domain | 328 | 404 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | MobiDBLite | consensus disorder prediction | 399 | 427 | - | - | |
Pral960g00067 | 522 | SUPERFAMILY | WRKY DNA-binding domain | 335 | 403 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 65 | 435 | IPR044810 | GO:0003700 | |
Pral960g00067 | 522 | MobiDBLite | consensus disorder prediction | 297 | 313 | - | - | |
Pral960g00067 | 522 | ProSiteProfiles | WRKY domain profile. | 165 | 229 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | Pfam | WRKY DNA -binding domain | 344 | 400 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral960g00067 | 522 | Pfam | WRKY DNA -binding domain | 171 | 227 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral960g00067 | Pral-Chr960 | 406437 | 411499 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral960g00067 | 40 | 522 | WRKY Transcription Factor Family | AT4G26640 | 52.364 | 1.00e-167 | 483 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pral960g00067 | WRKY | 1.2e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral960g00067 | - | - | gmx:100816583 | 665.225 |