Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00067 ATGGACGCCGCTATCAACTCCGCCGAGGCTCGCTCAGCTTCGGAGCTCCGGCTCCGCCAGGTCTCTTCCTCCGATCCGACTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCGCCTGGCCTTAGTCCCTCGTCGTTTCTTGACTCCCCCGTGCTTCTCTCCAACGTCAAGGCTCTCACAGATTTCAACAGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTGCTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGAAATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGCAGCCATGACACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGCCCCAGCTCCGGCATACTTTGGTGTTTTAAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGCCCTCATCTTTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1569 0.4678 MDAAINSAEARSASELRLRQVSSSDPTQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLDSPVLLSNVKALTDFNSHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNAPAPAYFGVLNNGSNPFGSSREPSSLNHTTYRCPQPQGIGRILTGP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00067 522 FunFam WRKY transcription factor 158 230 - -
Pral960g00067 522 MobiDBLite consensus disorder prediction 84 107 - -
Pral960g00067 522 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 SMART WRKY_cls 343 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 MobiDBLite consensus disorder prediction 285 313 - -
Pral960g00067 522 SUPERFAMILY WRKY DNA-binding domain 168 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 ProSiteProfiles WRKY domain profile. 338 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 FunFam WRKY transcription factor 33 330 396 - -
Pral960g00067 522 Gene3D WRKY domain 158 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 Gene3D WRKY domain 328 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 MobiDBLite consensus disorder prediction 399 427 - -
Pral960g00067 522 SUPERFAMILY WRKY DNA-binding domain 335 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 435 IPR044810 GO:0003700
Pral960g00067 522 MobiDBLite consensus disorder prediction 297 313 - -
Pral960g00067 522 ProSiteProfiles WRKY domain profile. 165 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 Pfam WRKY DNA -binding domain 344 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00067 522 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00067 Pral-Chr960 406437 411499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00067 40 522 WRKY Transcription Factor Family AT4G26640 52.364 1.00e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral960g00067 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00067 - - gmx:100816583 665.225