Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00066 ATGGACGCCGCTATCAACTCCGCCGAGGCTCGCTCAGCTTCGGAGCTCCGGCTCCGCCAGGTCTCTTCCTCCGATCCGACTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCGCCTGGCCTTAGTCCCTCGTCGTTTCTTGACTCCCCCGTGCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACTACTGGGTCTCTTACTAAACCTCTGTCTGTTCAAGAATCTGTTTGTCCTGCCACATATCCTGTAACCACTGCTCTCACAGATTTCAACAGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTGCTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGAAATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGCAGCCATGACACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGCCCCAGCTCCGGCATACTTTGGTGTTTTAAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGCCCTCATCTTTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1656 0.4674 MDAAINSAEARSASELRLRQVSSSDPTQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLDSPVLLSNVKVEPSPTTGSLTKPLSVQESVCPATYPVTTALTDFNSHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVAERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNAPAPAYFGVLNNGSNPFGSSREPSSLNHTTYRCPQPQGIGRILTGP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00066 551 MobiDBLite consensus disorder prediction 314 342 - -
Pral960g00066 551 FunFam WRKY transcription factor 187 259 - -
Pral960g00066 551 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 Gene3D WRKY domain 357 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 Gene3D WRKY domain 187 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 SUPERFAMILY WRKY DNA-binding domain 197 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 463 IPR044810 GO:0003700
Pral960g00066 551 ProSiteProfiles WRKY domain profile. 194 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 MobiDBLite consensus disorder prediction 112 142 - -
Pral960g00066 551 MobiDBLite consensus disorder prediction 428 456 - -
Pral960g00066 551 FunFam WRKY transcription factor 33 359 425 - -
Pral960g00066 551 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral960g00066 551 MobiDBLite consensus disorder prediction 326 342 - -
Pral960g00066 551 SUPERFAMILY WRKY DNA-binding domain 364 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00066 Pral-Chr960 406435 411499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00066 40 551 WRKY Transcription Factor Family AT4G26640 54.545 9.23e-180 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral960g00066 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00066 - - gmx:100816583 753.821