Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00051 ATGCCACAAAGAGAAATTTGCAGTTCGGTTGCAGAACCACGTCCTGTGGTCAGGAAGTTCTTGGCCAGACCTGCTGAAGGTGTCGGGGCCATTGTTAGAAGAAGCTTGGACGGTAAGTTTGAGCTGAAGTACTTTGATCCCTTCCTTGTACTGGATGAATTCTCAGTCACTGCCCCCGCTGGCTTTCCCGATCATCCACATAGAGGATTTGAGACTGTTACATACATGTTACAGGGAGCTGTGACTCATGAAGATTTTGAAGGACACAAGGGAACTATAGAAGCCGGTGATTTGCAGTGGATGACTGCAGGGAGAGGGATAGTCCACTCAGAGATGCCTGCAGCTCAAGGCACCCAAAAGGGCCTACAGCTTTGGATCAACCTCTCTTCCAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGCTAAGTAGGGACATAGCAGAAACTTCAAAAGATGGAATCAAAGTGAGAGTAATAGCAGGGGAAGCCTTAGGAATAAAGTCTCCTATCCAAACATGGACTCCAACAATGTACTTGGACTTCACTGTCAAACCAGGATCCCACCTGCAACAACCCATACCAGAGTCTTGGAATGCCTTTGTTTATGTGTTGGAAGGAGAGGGCGTGTTTGGTAGCCCTAAATCTCAGCCTGTGACCGCCCATCACATTCTTCTTCTTGGTTCTTCTGGGGATGGCTTGGAGGCTTGGAATAAGTCCAGCAGTAAGGTGGTTCGGTTCATTCTGGTTGGGGGTGAACCGTTGGGTGAGCCTCTGGTCCAGTTTGGACCGTTTGTGATGAACACTCAAGAGGAGATTGATCAAACTGTGAGTGATTTTGAGAACTGTGTTAATGGGTTTGAGAAAGCTAGACAATGGAGATCTGAAGCTGCAATTGGTCTTGATTTATAG 912 0.4682 MPQREICSSVAEPRPVVRKFLARPAEGVGAIVRRSLDGKFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSRDIAETSKDGIKVRVIAGEALGIKSPIQTWTPTMYLDFTVKPGSHLQQPIPESWNAFVYVLEGEGVFGSPKSQPVTAHHILLLGSSGDGLEAWNKSSSKVVRFILVGGEPLGEPLVQFGPFVMNTQEEIDQTVSDFENCVNGFEKARQWRSEAAIGLDL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00051 303 CDD cupin_pirin_N 32 128 - -
Pral960g00051 303 Gene3D Jelly Rolls 26 281 IPR014710 -
Pral960g00051 303 PIRSF Pirin 12 294 IPR012093 -
Pral960g00051 303 Gene3D Jelly Rolls 148 255 IPR014710 -
Pral960g00051 303 PANTHER PIRIN-RELATED 8 297 IPR012093 -
Pral960g00051 303 Pfam Pirin C-terminal cupin domain 179 285 IPR008778 -
Pral960g00051 303 Pfam Pirin 33 126 IPR003829 -
Pral960g00051 303 SUPERFAMILY RmlC-like cupins 23 295 IPR011051 -
Pral960g00051 303 CDD cupin_pirin_C 176 254 - -
Pral960g00051 303 FunFam pirin 26 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00051 Pral-Chr960 303732 307583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00051 13 291 Calmodulin-binding Proteins AT3G59220 57.651 2.82e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00051 K06911 - zju:107404287 530.406