Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral960g00035 ATGGCATCGTCTTCAGACTCATGGATGAAGGAATATAATGAAGCCGTGAAACTTGCTGATGATATCAGTGGCATGATTTCTGAACGGACTTCGTTTGCTACATCTGGACCTGAAACCCAGCGCCATGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACTAGACTTGATAGCTTGCAATCCCTTCTGTCAAAGCTTCCTGGGAAACAGCCTATATCTGACAAGGAGCTGAATCGGCGTAAGGACATGATTGCAAATTTGAGGTCAAAAGTTAACCAAATGGCATCAACATTGAATATGTCTGGCTTTGCAAACAGGGATAGTTTGCTTGGACCAGATACAAAACCGGCTGATGCCATGACCAGAACAGTTGGCTTGGATAACGGTGGACTTGTTGGACTTCAACGGCAAATTATGAGCGAGCAAGATGAGGGCCTTGAGAAATTGGAGCAGACTGTAACAAGTACAAAACATATTGCACTGGCTGTAAATGAAGAACTGGATTTACACACAAGACTCATTGATGACTTGGACCAGCAAGTAGATGTTACAGATTCTCGGCTGCGGAGGGTGCAGAAGAACTTGGCAGTTTTGAATAAGCGTACGAAGGGTGGTTGCTCCTGCTTGTGTTTGCTTTTAGCAGTTGTTGGTATAGTGGTTTTGGTTGGTGTTATATTTCTGTTGATCAAATTTTTGTAA 702 0.4288 MASSSDSWMKEYNEAVKLADDISGMISERTSFATSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKELNRRKDMIANLRSKVNQMASTLNMSGFANRDSLLGPDTKPADAMTRTVGLDNGGLVGLQRQIMSEQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQQVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCLLLAVVGIVVLVGVIFLLIKFL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral960g00035 233 PANTHER SYNTAXIN 34 217 IPR045242 -
Pral960g00035 233 SUPERFAMILY t-snare proteins 26 100 IPR010989 GO:0016020|GO:0016192
Pral960g00035 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Pral960g00035 233 CDD SNARE_Qc 140 197 - -
Pral960g00035 233 Gene3D - 139 201 - -
Pral960g00035 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Pral960g00035 233 Pfam SNARE domain 174 223 IPR000727 -
Pral960g00035 233 Coils Coil 175 195 - -
Pral960g00035 233 FunFam syntaxin-51 isoform X2 139 201 - -
Pral960g00035 233 SMART tSNARE_6 132 199 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral960g00035 Pral-Chr960 255367 258414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral960g00035 1 233 SNARE and Associated Proteins AT1G16240 70.815 3.49e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral960g00035 K08503 - rcu:8268133 360.147