Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral960g00033 | ATGGAATTGGCGATGGTTGCTGAGGGAACGGAGCCGCCGGAGGAGACGCAATCCGAGGGCTTGCCGGTGAAAAGGGCGATTGAGAATGGTGGGAGTGAGGAATTGGCCAAGAAGCCTAAGGTTGAAGCAGCGGCGGCTGCGGCTGCGGCTGCTGCGTCTAGCGGGGAGTTGAAGAGAGTGGCGGAGCTTGTGCTGGTTTTGTCGACGATGTCGGCAATGCGAGGCGGGAAGAAGCCCACTAATGTGGAGATTGAGTTGATGAAGGAGGCGAGGATGAAGTTGGTGGAGTTGTGTCAAGGGATGGCCCCCAAGGATATTGTGGCAAGGGAAGCTGTGGGGACTGTGATTGAGGATCTTGGATTGAACGGGAAGATTAAAGACCAGGGATTAGGGTTTCAAACTCCAAAGATGTCTATAACCGAAAGGTTCTCACTCTCCAAGTTGAAGATGGAAGAATCAAAGAAGTTTCATGAACATTCTGCTCCATCTACTTCTCAGCCATTGCAAACAAGCATGGGTAGTGGAATGGTTGAAAACCGTATGCCATCTCATACTGTTCGAATGTTTCCTTCGGACAAGTCAAGCCACACAGGAGTCTCGTCTTCTGGTACCATAACTTCTCCTCACGTGACTCATGTTCCTGCTGGATCTTCTTCTGGTTTGCACTATCAGTCAACTACTACTGAAGTAAAATCACCTATAGTTTCTGGCGGAATGCCTAGCAGTCACTTGGGCAGAAATTCATCTTCATCAGCATTGCCTAAAGTTGAACAACCACAGTTCAAAGTTGATGGAGGATCAAGTGGGCCTTATTTGATGCATGCTCAAGCAAATTCTTCAAACCAACCGTTGATGAATGCTCCAACATGGTCAATACAAACTCAAACTCAATCTGGCTCATTAGCTAGGAGTACACCAGAAAACAAAGTGACTGGACATAACCCTGTCAAGGTTGAGGGAATGGGTGACCTAACTGGGCCCAGGGCTGCTTCACAAATAGCTAGGGATCAGGGCTATAGACCCATAGTAACTCAAACATCCCCTGGAAATTTGTCTAGCTTGCACCAACCATTGCAGGGCATGAACATTGTTCAGCCTTCTTCACTTCCTAATAATCACACTGAAATTGCAAGGATTGTCCAGAGACTGTTACAACCAAAGCTGCCTGAGCATCCCACATGGACTCCTCCATCAAGGGATTATATGAATAAGGCATTTACTTGCCAAATGTGTGATCTCACTGTCAATGAAGTGGATACTGTGCTTCTTTGTGACGCTTGTGAAAAAGGGTTTCATTTGAAGTGTTTGCAGCCATCACTTTTAAGAGGAATTCCTAGAGGTGAGTGGCATTGCATGAGGTGCTTGACATTAAGCGGTGGAAAGCCTTTGCCTCCAAAATATGGTCGCGTGATGAGGTCCGCAAACACCCCACCAAAAGTGCCCTCTAATGCAGTTGGAGTCCAACCATCGTTAGAGAAGAAAACTGGAGTTGTAGCTCCAAAGGTCAGCTCACAGGAGTTAACAACAAATGGAGGCTCTGTGTCAACTGATGCCACTGGTAACAATAAAAATGTTGAGCTTCCATCTGTCTCAAAGGTCCCTGATGCAAAAGAAATTCAGGATAACACTCATTCATCAAGCAGCAAACACATGGATGAGAAGCCTGACCCAAATATCTCAATAAAATCCCTTAATGCAGCTTCTAGTCCTGCTGTTGGCATGCCAGGTGAAAGTTCTGCTGAACAAATAATTTCTGAGCCATCCACCTCTAAAGAGAGAACCTTTGCCTCAGAATCAGAAGTGCTTCCTCAATTAACTGAGTCAGTTAAACCTGACAATTTGCAAATGTCAAAAGCTGTACAAGTTGAACTGACATCACTACCAAACAATGTTGACGTTTTGTCATATAAACATGTTGAAAATAATTTGACAGGTAATAACAGAAAGGAATCTCATGGGGGAGAAAGTTTGACATATGATATCAAACGTGATGACCAATATGTTGCACTAGCAAATTCTGATAAAAGTTCTGGAACACATGGTGAAGGGAGACAATGCACTGCATTATATTCCGATGGCTTACATGCAGTAGAATGGGTTGGTGATCTTGTGCAACTTGTTGATGAGAAAAGGTTTTACCAATCATGCCAAGTTAATGGAGTTACATATAGGCTGCAGGATCATGCTCTTTTTAAATCCAGTCATGGCAAGCTAATTCCATCTAAACTGCAGTCTATGTTTGAAGATAGCAAAACTGGATTGAAGTGGGTAAATGTGACAAAGTGCTACTTTCCTGGTGATTTACCAGGGAATATCCCTCATCCATGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTGGATCCATTCAAGGTCCCTGTGAAGTCCTCCCGTCTTTTAAATTTCAACAAGAAAACAATAGACGAAGGGGGTTAGAACCTGAGGAAAGTGCTAGACTTCGGCCCATTTTCCTATGCAGATGGTTCTATGATGGAGTCAAAAAATTATTTCAGCCTGTTACCAGTTGA | 2550 | 0.4412 | MELAMVAEGTEPPEETQSEGLPVKRAIENGGSEELAKKPKVEAAAAAAAAAASSGELKRVAELVLVLSTMSAMRGGKKPTNVEIELMKEARMKLVELCQGMAPKDIVAREAVGTVIEDLGLNGKIKDQGLGFQTPKMSITERFSLSKLKMEESKKFHEHSAPSTSQPLQTSMGSGMVENRMPSHTVRMFPSDKSSHTGVSSSGTITSPHVTHVPAGSSSGLHYQSTTTEVKSPIVSGGMPSSHLGRNSSSSALPKVEQPQFKVDGGSSGPYLMHAQANSSNQPLMNAPTWSIQTQTQSGSLARSTPENKVTGHNPVKVEGMGDLTGPRAASQIARDQGYRPIVTQTSPGNLSSLHQPLQGMNIVQPSSLPNNHTEIARIVQRLLQPKLPEHPTWTPPSRDYMNKAFTCQMCDLTVNEVDTVLLCDACEKGFHLKCLQPSLLRGIPRGEWHCMRCLTLSGGKPLPPKYGRVMRSANTPPKVPSNAVGVQPSLEKKTGVVAPKVSSQELTTNGGSVSTDATGNNKNVELPSVSKVPDAKEIQDNTHSSSSKHMDEKPDPNISIKSLNAASSPAVGMPGESSAEQIISEPSTSKERTFASESEVLPQLTESVKPDNLQMSKAVQVELTSLPNNVDVLSYKHVENNLTGNNRKESHGGESLTYDIKRDDQYVALANSDKSSGTHGEGRQCTALYSDGLHAVEWVGDLVQLVDEKRFYQSCQVNGVTYRLQDHALFKSSHGKLIPSKLQSMFEDSKTGLKWVNVTKCYFPGDLPGNIPHPCISEVNEVYESNSDRTEMAGSIQGPCEVLPSFKFQQENNRRRGLEPEESARLRPIFLCRWFYDGVKKLFQPVTS | 849 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 501 | 528 | - | - | |
Pral960g00033 | 849 | ProSitePatterns | Zinc finger PHD-type signature. | 408 | 454 | IPR019786 | - | |
Pral960g00033 | 849 | ProSiteProfiles | Zinc finger PHD-type profile. | 405 | 457 | IPR019787 | - | |
Pral960g00033 | 849 | ProSiteProfiles | BAH domain profile. | 721 | 848 | IPR001025 | GO:0003682 | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 537 | 557 | - | - | |
Pral960g00033 | 849 | Gene3D | - | 700 | 849 | IPR043151 | - | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 299 | 324 | - | - | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 494 | 557 | - | - | |
Pral960g00033 | 849 | Pfam | PHD-finger | 408 | 455 | IPR019787 | - | |
Pral960g00033 | 849 | SUPERFAMILY | FYVE/PHD zinc finger | 398 | 462 | IPR011011 | - | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 152 | 173 | - | - | |
Pral960g00033 | 849 | CDD | BAH | 720 | 848 | - | - | |
Pral960g00033 | 849 | SMART | PHD_3 | 407 | 455 | IPR001965 | - | |
Pral960g00033 | 849 | MobiDBLite | consensus disorder prediction | 190 | 255 | - | - | |
Pral960g00033 | 849 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 397 | 468 | IPR013083 | - | |
Pral960g00033 | 849 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 18 | 848 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral960g00033 | Pral-Chr960 | 236763 | 243292 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral960g00033 | 407 | 455 | C2H2 Transcription Factor Family | AT3G01460 | 42.857 | 1.64e-07 | 53.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Pral960g00033 | PHD | 1e-08 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral960g00033 | - | - | gmx:100807139 | 1052.74 |