Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral956g00018 ATGGACCACGTCGCGTCGGCGTCACTTTCCAAAGAGCCCTCCGAAGAACAGTTCTGCCTTGCACTTCGCAATGGTCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCCGGGGCTGTTCTCAAGGTGGTCGACTATGCTACTCTTGCTGTTCAATCTGCAGAAGGAGCCGCTCAGTCTGCCATTCAGTATTTTGAGAATATGAGAAATTTTCTTGAGGCTGTCAAGGATATGAAGCTATTGACGTTTGAAGCATCAGATTTAGAAAAGGGTGGTTCAATGAATAAAGTTGTGGATTGTATTCTATGTTTGAAAGGATATTATGAATGGAAGCTAGCGGGTGGAGTTGGAGAATGGAGGTATGGAGGAACAGTGAGGATTGTCTCACTTCCAAAAGAGTCTTCTTCCTCCATAACTGGCAGTGAAGGTACTGATGAATCCCTGGATGAGTCTGAGTCATCACAATATGAACAGCTGCTAGAATTTCTCCATCTATCGAGTGAGATCTCGATTGAAGAAACCAGAACTTTCAATGCGTTGGCGTTCCTATTTGATCACTTTGGACTCAGACTCCTTCAAGCTTACCTTAGAGAGATGGACGGGATTGAAGATCTGCCTATGAATTCAATGGTAATTGATGTATTGCTCGGTAAGGTAGTCAAAGATTTCTCAGCATTGCTTGTTTCTCAACGCAATCAGCTTGGTCTTTTCTTGAAGAAAATATTGAAAGGTGATATTGGTTGCCTATCAAAAACAGAGTTCATAGAAGCAATCTCATTATATCTTAACCAAAGAAGTAGTTTGGCGTCCAAGGATTTTTCAAAATTCTGCATTTGTGGAGGAAAAGTTGACCGCACTCGGAATGAGAGCAATTATTCTTCCAACCATGTTGAGATAATTAATAATCAACAGAGTCAACTTGAGGGCATGAAATACTTTTTCCAAGAGACAAAGATGGAGGTCAAACAAATTCAATCAGAGTGGGAGCAAGAATTGGGCAGGCTTGAGCATCATATAAAGAGCCTAGAAGTGGCAGCCTCTTCCTACCACAAAGTCTTGGAGGAGAACCGCCAACTCTACAACCAAGTACAAGACCTGAAAGGAACTATTAGGGTCTATTGCAGAGTGAGACCCTTCTTACCAGGACAATCAAATGTAAAGTCAACTGTAGATTATATAGGAGAAGGTGGAAATATCATGATCGTTAATCCCCTTAAGCAGGGTAAAGATGCAAGGAGAGTGTTTCAATTCAATAAGGTCTTTGCAACAAATGTCACACAAGAACAAATATACGCTGACGCGCAACCATTGGTCAGGTCTGTTTTAGATGGCTATAATGTGTGCATCTTTGCATATGGACAAACTGGCTCTGGGAAGACATACACAATGAGTGGCCCAGATTTAACGACCGAAGAGACATGGGGGGTAAACTACAGGGCTCTGTGTGACTTATTCCAGATATCAAAGGAAAGGTTGAATGCCATAAAATATGATGTTGGAGTACAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAATAGAAGATTAGATATACGAAACAACTCCCAATTGAATGGCCTTAATGTGCCTGATGCTTGTTTAGTTCCAGTTAATTGTACTCAAGATGTTCTTGATTTAATGAGGATTGGTCAGAAGAACCGGGCAGTGGGTGCTACTGCTCTAAACGAGCGAAGCAGCCGTTCTCATAGTATTTTGACAATTCATGTTCGAGGAAGAGAGCTAGTTTCTAATTCCATTCTTAAAGGTTGTCTCCATCTTGTTGATTTGGCTGGAAGTGAAAGGGTGGACAAATCTGAGGCTGCGGGAGAAAGACTGAAGGAAGCGCAACATATAAATAGATCTCTATCTGCACTGGGAGATGTTATATCTGCTTTGGCACAAAAAAGTCCACATATTCCTTACAGAAATAGCAAGCTCACACAAGTATTACAAGATTCTTTAGGTGGGCATGCCAAAACTTTGATGTTTGTTCATATAAATCCTGAACAAAATGCTCTTGGGGAGACAATTAGCACGCTCAAGTTTGCTGAGAGGGTGGCATCCATTGAACTTGGTGCTGCACAGTCTCATAAGGAAACCGGTGAAATTAAAGAGCTGAAAGAGGAGGTATCAAACCTCAAGTTGGCATTGGAGAGGAAGGAGGCTGAACTGGAGCAATGGAGAGCTGGGCATGCTCGAAACACTGTAGAATCTCAGAAACAAAGGGCAGTTTCCCCATTTCGCCTTCCCAAATTAGGAGTCAATGCCAGCATGAAGTCGGAAACCTCCCAGCGACCGACTGATGATAAAATATACGAGGCTAGAAGTTGTTCCTCGGGAAAGCAAAGAAGGTCAAGATTTCCCTCATCATTCATGGACAAAGAATCCACCCCAAGAATGCCTCATCTGCCTGAAGAAAAGATAGCAAACTCAGCTAAAGGAAGATCACCGTCTCCTCCTATCAGGAGATCAATATCCACTGACAGAGGTTCAGTCATTAAAAGCAAGGTAAAAATTGACATGGTAGATAACCAGCCAATAGTAAAACATCCATTTCCAGCCCGAGTACCAGTGAACAAATCTCTTTCCCCCATGCCTATGGCCCCATGCACTGACAATAACTCGAGGATTAATGGAAGTTCATACGAGACGACGAAGCAGGAAAATATTTCTGAAGCTCTATTCAACCTCCAGAAGGTCACCTCCAGGAAAGTTCATCATGAACAAGAAGAGGAACAATTTAAACAAGCACTTACTGCAGTAAGACAAGGTGGTATAAGAAAGAGCAAGGCTGAGGGGAAGGCCAAGGTCAAGCATCAACATCAGCAGCATCAGCAACTCCCTTTTAGGATTCAGAAGTCTGATTTCATCCCCGCATTGATCCCTGAAATGGACATTGCTGATGAGAAGACATTGGAGGCAGCTAGAAAGAGTGATTACTCTGAGCCGGAAAATGATTTTGGCCTAATCGAGTCGCCAGTTCATGGTGCTTTAAACCTTAGAAAGATACGTCAGAATTTCCCGAGAAACTCTCAGAACCTTGAACCCAGAAGAACAATGCAAGCAGGGGAACCCTTATTGGCTAGCAGGGTTGAAAACAAACTTGTAAATGGCTCAAGCAGAAATCTCAGGGAAGGAAGCAATACACCCATGCCTGAACTCAGGAGAAGCAGATCAACCCCACGCGGAAAATTCCTTTTATCATGA 3231 0.4259 MDHVASASLSKEPSEEQFCLALRNGLILCNVLNKVNPGAVLKVVDYATLAVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGSMNKVVDCILCLKGYYEWKLAGGVGEWRYGGTVRIVSLPKESSSSITGSEGTDESLDESESSQYEQLLEFLHLSSEISIEETRTFNALAFLFDHFGLRLLQAYLREMDGIEDLPMNSMVIDVLLGKVVKDFSALLVSQRNQLGLFLKKILKGDIGCLSKTEFIEAISLYLNQRSSLASKDFSKFCICGGKVDRTRNESNYSSNHVEIINNQQSQLEGMKYFFQETKMEVKQIQSEWEQELGRLEHHIKSLEVAASSYHKVLEENRQLYNQVQDLKGTIRVYCRVRPFLPGQSNVKSTVDYIGEGGNIMIVNPLKQGKDARRVFQFNKVFATNVTQEQIYADAQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALCDLFQISKERLNAIKYDVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDACLVPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSILTIHVRGRELVSNSILKGCLHLVDLAGSERVDKSEAAGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEQNALGETISTLKFAERVASIELGAAQSHKETGEIKELKEEVSNLKLALERKEAELEQWRAGHARNTVESQKQRAVSPFRLPKLGVNASMKSETSQRPTDDKIYEARSCSSGKQRRSRFPSSFMDKESTPRMPHLPEEKIANSAKGRSPSPPIRRSISTDRGSVIKSKVKIDMVDNQPIVKHPFPARVPVNKSLSPMPMAPCTDNNSRINGSSYETTKQENISEALFNLQKVTSRKVHHEQEEEQFKQALTAVRQGGIRKSKAEGKAKVKHQHQQHQQLPFRIQKSDFIPALIPEMDIADEKTLEAARKSDYSEPENDFGLIESPVHGALNLRKIRQNFPRNSQNLEPRRTMQAGEPLLASRVENKLVNGSSRNLREGSNTPMPELRRSRSTPRGKFLLS 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral956g00018 1076 SMART kinesin_4 367 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 SUPERFAMILY Calponin-homology domain, CH-domain 12 125 IPR036872 -
Pral956g00018 1076 SUPERFAMILY BAR/IMD domain-like 286 367 IPR027267 -
Pral956g00018 1076 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 895 IPR027640 GO:0003777|GO:0007018
Pral956g00018 1076 Pfam Kinesin motor domain 375 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 Coils Coil 704 738 - -
Pral956g00018 1076 MobiDBLite consensus disorder prediction 740 834 - -
Pral956g00018 1076 CDD CH_AtKIN14-like 1 105 - -
Pral956g00018 1076 FunFam kinesin-like protein KIN-14F 364 738 - -
Pral956g00018 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 734 IPR027417 -
Pral956g00018 1076 SMART ch_5 1 107 IPR001715 GO:0005515
Pral956g00018 1076 MobiDBLite consensus disorder prediction 771 788 - -
Pral956g00018 1076 ProSiteProfiles Calponin homology (CH) domain profile. 1 109 IPR001715 GO:0005515
Pral956g00018 1076 Gene3D - 1 110 IPR036872 -
Pral956g00018 1076 ProSiteProfiles Kinesin motor domain profile. 369 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 MobiDBLite consensus disorder prediction 1042 1076 - -
Pral956g00018 1076 FunFam kinesin-like protein KIN-14F 1 109 - -
Pral956g00018 1076 Coils Coil 325 345 - -
Pral956g00018 1076 PRINTS Kinesin heavy chain signature 598 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 PRINTS Kinesin heavy chain signature 647 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 PRINTS Kinesin heavy chain signature 567 584 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 PRINTS Kinesin heavy chain signature 444 465 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral956g00018 1076 Gene3D Kinesin motor domain 311 699 IPR036961 -
Pral956g00018 1076 MobiDBLite consensus disorder prediction 1042 1063 - -
Pral956g00018 1076 Pfam Calponin homology (CH) domain 15 109 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral956g00018 Pral-Chr956 102775 108886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral956g00018 357 722 Calmodulin-binding Proteins AT5G65930 41.129 1.90e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral956g00018 K10406 - gmx:100793458 1650.18