Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral955g00005 AACCTTCAACGTTTAAGTCTAAGTAACAACAAATTGCACGGGTTCATTATAAATGAACTTTGCCAACTCAAAGGTCTAAGTGAGTTGTATCTTGCTAAGAACATGTTTTCAGGAGCAATTCCAGGATGTCTCAGAAATACTTCTTTACGGAAGTTAAATTTTAGCTCTAACAAATTGATATCTCATATACCCTCTTCTTTTTGGGATCTCAAAGATATCTTGCTTTTAGACATATCTTCTAATGCACTAAGTGGAATGATTTTACCAGAGGTATCAAACTTGAGAGCAATTATACTATTGAACTTGTCCAGAAACCAAATTTCAGGAAGCATCCCTGCAACTATGGGAAGCTTGCAAACTTTACAGACTTTATCTTTAGCTCACAACAAATTGCAAGGGCCTATTCCTGAAACGTTTAGTGGCATGATAAGCATGGAGTCTATGGATCTTTCTCATAATTACTTATCTGGGGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAACTACATCAATCTTTCCTACAATTTATTGCATGGAGAAATTCCTGATGGTGGCCCTTTTTGGAATTTTACTGCCCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTTCAACCATGTAGGAGAGGAAACAAGCACATATCAAATAAAGTGATGCTACTGATAAAATGCTTATTGCCCATCATGTTTGTCATTTTGGTTGTTTCAAGCATTATCTTTCTAAAGCATAAGAGAGATGATGATAATTATTCAACCAAAAAGGATTTAACAGATTTGGATACACCAACTAGGATATCCTATTATGAACTTCTACAAGGAACAAATGGATTTGATGAGAGTAATCTTCTAGGCTCTGGAAGTTTTGGATCAGTATACAAAGTAATTCTTCCTAATGAAAATATAGTTGCTGTCAAAGTATTTAATAACTTAGACACAGAAGAAGCATTAAGAAGTTTTGATATTGAATGTGCTGCCGTACGCAATTTACGCCATCGCAATCTCATTAAAACCATTAGCAGTTGCTCAAACAATCATTTCAGATCTCTAATAATGGAATTCATGGCAAATGGGAGTCTCAACAAATGGTTGTACTCTCATAACTATTATTTAAATGTCTTGCAAAGGCTGAATATAATGATAGATGTGGCAACAGCTTTGGAGTATCTTCATCATGGTTCTCCTATACTAGTTGTTCACTGTGATGTGAAACCAAGCAATATTTTGTTAGACGCAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAATTATTTGGTGAAAAGCAATCAAAAATTTATACCAAATCTTTGGCTACTATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTTGTCTCTACCAAAGGAGATGTGTATAGTTATGGTATTTTGCTGATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAGATATTTGTTCAAGGATTAAATTTGAAAGACTGGGTGAGCAAATCCACACCACATTCAATCATCAATATTATAGATGCAAATTTGTTGCATAGAAAAAATCAAAATACTGATAATATATTATCTCATATATCATCAGTTTTTGATCTAGCATTAAAGTGTTGCAATGACTTACCTGAAGTACGACTTACTATGATTGATGTTGTAGTGTCATTGAAAAATATCAAGGCTTTGTTAATGGAAAATGCTCAGGACATTGTTAGTTGA 1722 0.342 NLQRLSLSNNKLHGFIINELCQLKGLSELYLAKNMFSGAIPGCLRNTSLRKLNFSSNKLISHIPSSFWDLKDILLLDISSNALSGMILPEVSNLRAIILLNLSRNQISGSIPATMGSLQTLQTLSLAHNKLQGPIPETFSGMISMESMDLSHNYLSGVIPKSLESLLYLNYINLSYNLLHGEIPDGGPFWNFTAQSFMMNKDLCGKSQLQVQPCRRGNKHISNKVMLLIKCLLPIMFVILVVSSIIFLKHKRDDDNYSTKKDLTDLDTPTRISYYELLQGTNGFDESNLLGSGSFGSVYKVILPNENIVAVKVFNNLDTEEALRSFDIECAAVRNLRHRNLIKTISSCSNNHFRSLIMEFMANGSLNKWLYSHNYYLNVLQRLNIMIDVATALEYLHHGSPILVVHCDVKPSNILLDADMVAHLSDFGIAKLFGEKQSKIYTKSLATIGYMAPEYGSKGVVSTKGDVYSYGILLMEMFTRKKPTDEIFVQGLNLKDWVSKSTPHSIINIIDANLLHRKNQNTDNILSHISSVFDLALKCCNDLPEVRLTMIDVVVSLKNIKALLMENAQDIVS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral955g00005 573 Gene3D Phosphorylase Kinase; domain 1 266 360 - -
Pral955g00005 573 SMART serkin_6 284 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral955g00005 573 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Pral955g00005 573 SUPERFAMILY L domain-like 1 204 - -
Pral955g00005 573 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 212 - -
Pral955g00005 573 Gene3D Transferase(Phosphotransferase) domain 1 361 571 - -
Pral955g00005 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Pral955g00005 573 ProSiteProfiles Protein kinase domain profile. 284 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral955g00005 573 Gene3D Ribonuclease Inhibitor 1 222 IPR032675 -
Pral955g00005 573 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Pral955g00005 573 SUPERFAMILY Protein kinase-like (PK-like) 264 563 IPR011009 -
Pral955g00005 573 Pfam Protein kinase domain 285 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral955g00005 573 PANTHER OS04G0122200 PROTEIN 1 561 - -
Pral955g00005 573 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 361 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral955g00005 Pral-Chr955 63605 65543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral955g00005 1 561 Receptor kinase-like Gene Family AT3G47570 38.111 2.84e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral955g00005 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral955g00005 - K13420 pcin:129285519 822.772