Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral955g00002 ATGAAAAGAAGCAGGAAAGATATGGAGCAGAAGAATGTTTTGCTGTCAGCATTGGGTATTGGGGTTGGTTTTGGAGCAGGGCTTGGATTCAGTTCAGGGCTTGGAGGGAATTCTGATGAAGAAGAAGAGCTCTGGAATGAGCAAGTTAAGCAAGAACTTATGAGGCAGGTTATTGATGGGAAGGAATGCAAAGAAACTTTCCAAGACTTTCCTTATTACTTAAGTGAAAGTAGTCGGCAGCTATTGATGAGTGCTGCATTTGTTCATCTAAAACAACTTATCTTCTCTAGACACATCCGGAACCTTCCACAAACAAGCAGGGCAATCTTACTTTCTGGTCCAACAGAACTTTACCTGCAAACAATTGCCAAGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTGCTAGATATTGCTGACTTCTCTGTCAAGGTGAGGAGAAAATATGGATGTCCAAGAAAAGAATCCTCTTCTAAAAGGTCCTTATCTGAGGTGGCTTCCAAGAGATTGGCCAGTCTGTTTGGTTCCTCTTCGACTAGTGAAGCTGAAGATCCCCCTAAGAACAAAAGTGACATGTGCATGGATGAAGAATTCTTCATGCAGTTGCTTTATAAGGTCGTGGTTTCTGTCTCAGAAAAAAGTTCCATTATATTATACATCAGGGATGTTAAGAGGATTTTCCTAGAATCAGAACAACTGTATAAGTTGTTTCAAGAAATTCTAGAGAAACTTTCAGGGCCAATTTTGATACTTGGTTCCCAAATAACTGATGTTGAAGATGAATGGTCAGAAGATGAGTTGCTGGGAAATGAGTGGTTACCATGTTTTGTTCCACCACCAGAAGCTGGTGCAGAAGTTGATGAAAGGCTCGCTGCATTATTCCCTTACAATATTCAGATCAAACCTCCTAAAGATGAGCATAATCTTCAAAACTGGAAAACCCAACTAGAGGGGGACAAGAAAACAATTCAGTCTCAAGATAACCAAAACCACATTGCTAAAGTACTAGCAGAAATGGATGTTGAATGTAAAGACTTGAATTCAATCAACCACGAGGATACAGAAGTACTAAGCAAACATATTGAAGAAATTGCGGTATCTGCAGTATCTTACTACTTGATGAATACCAAGGATCCAGAATATCATAATGGAAAGCTTGTAATATCATCTGAAAGTTTGTGCCACAGTTTGGGTCTATTCCGCAAAAGCAATACTGTCAATGATACTCAGAAGACAGAGACTGATGGAAACAAAGAAGTTCCTCCGGACAATAATTATGAAGCAAACATGAGATCAGAGCTTATCCCTGCAAATCAGATAGGAGTTACATTCGCAGATATTGGTGCATTAGAGGAAGTTAAGGAATCACTCCAAGAGCTAATCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAGGTGGACTTCTTAAGCCTTGTCGAGGTATTCTACTTTTCGGACCTCCAGGAACCGGCAAAACAATGCTTGCAAAGGCAATTGCACATGAAGCAGGAGCAAGTTTCATCAATGTTCCAATGTCTGCCATCACATCAAAGTTCTATGGAGAAGACGAGAAGAATGTCCGAGCTATCTTCACACTGGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCTTACTTGGGCAACGAGCAAGATGCGGAGAGCATGAGGCTACGAGGAGGATTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGATGAGAGAATTCTAGTTCTTGCCGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTCAGCGAAATTCATGGTTGGTCTTCCATCTGTTGAGACTAGGGAGATTATCTTGA 1872 0.4065 MKRSRKDMEQKNVLLSALGIGVGFGAGLGFSSGLGGNSDEEEELWNEQVKQELMRQVIDGKECKETFQDFPYYLSESSRQLLMSAAFVHLKQLIFSRHIRNLPQTSRAILLSGPTELYLQTIAKALAHHFESKLLLLDIADFSVKVRRKYGCPRKESSSKRSLSEVASKRLASLFGSSSTSEAEDPPKNKSDMCMDEEFFMQLLYKVVVSVSEKSSIILYIRDVKRIFLESEQLYKLFQEILEKLSGPILILGSQITDVEDEWSEDELLGNEWLPCFVPPPEAGAEVDERLAALFPYNIQIKPPKDEHNLQNWKTQLEGDKKTIQSQDNQNHIAKVLAEMDVECKDLNSINHEDTEVLSKHIEEIAVSAVSYYLMNTKDPEYHNGKLVISSESLCHSLGLFRKSNTVNDTQKTETDGNKEVPPDNNYEANMRSELIPANQIGVTFADIGALEEVKESLQELIMLPLRRPELFKGGLLKPCRGILLFGPPGTGKTMLAKAIAHEAGASFINVPMSAITSKFYGEDEKNVRAIFTLAAKVSPTIIFIDEVDSLLGQRARCGEHEATRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFQRNSWLVFHLLRLGRLS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral955g00002 623 SMART AAA_5 479 623 IPR003593 GO:0016887
Pral955g00002 623 ProSitePatterns AAA-protein family signature. 586 605 IPR003960 GO:0005524|GO:0016887
Pral955g00002 623 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 609 - -
Pral955g00002 623 Gene3D - 442 609 IPR027417 -
Pral955g00002 623 Pfam ATPase family associated with various cellular activities (AAA) 483 609 IPR003959 GO:0005524|GO:0016887
Pral955g00002 623 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 442 616 - -
Pral955g00002 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 606 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral955g00002 Pral-Chr955 23891 28257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral955g00002 443 608 Calmodulin-binding Proteins AT3G56690 39.645 2.95e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral955g00002 - - pcin:129300821 818.92