Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral955g00001 ATGAAAAGAAGCAGGAAAGATATGGAGCAGAAGAATGTTTTGCTGTCAGCATTGGGTATTGGGGTTGGTTTTGGAGCAGGGCTTGGATTCAGTTCAGGGCTTGGAGGGAATTCTGATGAAGAAGAAGAGCTCTGGAATGAGCAAGTTAAGCAAGAACTTATGAGGCAGGTTATTGATGGGAAGGAATGCAAAGAAACTTTCCAAGACTTTCCTTATTACTTAAGTGAAAGTAGTCGGCAGCTATTGATGAGTGCTGCATTTGTTCATCTAAAACAACTTATCTTCTCTAGACACATCCGGAACCTTCCACAAACAAGCAGGGCAATCTTACTTTCTGGTCCAACAGAACTTTACCTGCAAACAATTGCCAAGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTGCTAGATATTGCTGACTTCTCTGTCAAGGTGAGGAGAAAATATGGATGTCCAAGAAAAGAATCCTCTTCTAAAAGGTCCTTATCTGAGGTGGCTTCCAAGAGATTGGCCAGTCTGTTTGGTTCCTCTTCGACTAGTGAAGCTGAAGATCCCCCTAAGAACAAAAGTGACATGTGCATGGATGAAGAATTCTTCATGCAGTTGCTTTATAAGGTCGTGGTTTCTGTCTCAGAAAAAAGTTCCATTATATTATACATCAGGGATGTTAAGAGGATTTTCCTAGAATCAGAACAACTGTATAAGTTGTTTCAAGAAATTCTAGAGAAACTTTCAGGGCCAATTTTGATACTTGGTTCCCAAATAACTGATGTTGAAGATGAATGGTCAGAAGATGAGTTGCTGGGAAATGAGTGGTTACCATGTTTTGTTCCACCACCAGAAGCTGGTGCAGAAGTTGATGAAAGGCTCGCTGCATTATTCCCTTACAATATTCAGATCAAACCTCCTAAAGATGAGCATAATCTTCAAAACTGGAAAACCCAACTAGAGGGGGACAAGAAAACAATTCAGTCTCAAGATAACCAAAACCACATTGCTAAAGTACTAGCAGAAATGGATGTTGAATGTAAAGACTTGAATTCAATCAACCACGAGGATACAGAAGTACTAAGCAAACATATTGAAGAAATTGCGGTATCTGCAGTATCTTACTACTTGATGAATACCAAGGATCCAGAATATCATAATGGAAAGCTTGTAATATCATCTGAAAGTTTGTGCCACAGTTTGGGTCTATTCCGCAAAAGCAATACTGTCAATGATACTCAGAAGACAGAGACTGATGGAAACAAAGAAGTTCCTCCGGACAATAATTATGAAGCAAACATGAGATCAGAGCTTATCCCTGCAAATCAGATAGGAGTTACATTCGCAGATATTGGTGCATTAGAGGAAGTTAAGGAATCACTCCAAGAGCTAATCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAGGTGGACTTCTTAAGCCTTGTCGAGGTATTCTACTTTTCGGACCTCCAGGAACCGGCAAAACAATGCTTGCAAAGGCAATTGCACATGAAGCAGGAGCAAGTTTCATCAATGTTCCAATGTCTGCCATCACATCAAAGTTCTATGGAGAAGACGAGAAGAATGTCCGAGCTATCTTCACACTGGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCTTACTTGGGCAACGAGCAAGATGCGGAGAGCATGAGGCTACGAGGAGGATTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGATGAGAGAATTCTAGTTCTTGCCGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTCAGCGAAGATTCATGGTTGGTCTTCCATCTGTTGAGACTAGGGAGATTATCTTGAAAACCATGCTAGCCAAGGAAAATACTGAAAAGTTGGACTTCAAAGAGCTTGCAATCATGACAGAGGGATATACTGGGAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCAGTTAAGGAGCTAATAAAGCAGGAGAGATTGAAGGATATGGAAAAGAATAAAAATGAAGCTGAAGGCCAAACTCAGAAGCCGCTTCAAGTGCCAAAGAGGATACAAATGAGAAAGAAAAGAATAAGAAAGATGCTGAAGGCCAAAGCTCAAAGGCTGATTCAAGTGCTAAGAAGGACAAAGAAGATCAAGTAA 2184 0.4071 MKRSRKDMEQKNVLLSALGIGVGFGAGLGFSSGLGGNSDEEEELWNEQVKQELMRQVIDGKECKETFQDFPYYLSESSRQLLMSAAFVHLKQLIFSRHIRNLPQTSRAILLSGPTELYLQTIAKALAHHFESKLLLLDIADFSVKVRRKYGCPRKESSSKRSLSEVASKRLASLFGSSSTSEAEDPPKNKSDMCMDEEFFMQLLYKVVVSVSEKSSIILYIRDVKRIFLESEQLYKLFQEILEKLSGPILILGSQITDVEDEWSEDELLGNEWLPCFVPPPEAGAEVDERLAALFPYNIQIKPPKDEHNLQNWKTQLEGDKKTIQSQDNQNHIAKVLAEMDVECKDLNSINHEDTEVLSKHIEEIAVSAVSYYLMNTKDPEYHNGKLVISSESLCHSLGLFRKSNTVNDTQKTETDGNKEVPPDNNYEANMRSELIPANQIGVTFADIGALEEVKESLQELIMLPLRRPELFKGGLLKPCRGILLFGPPGTGKTMLAKAIAHEAGASFINVPMSAITSKFYGEDEKNVRAIFTLAAKVSPTIIFIDEVDSLLGQRARCGEHEATRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFQRRFMVGLPSVETREIILKTMLAKENTEKLDFKELAIMTEGYTGSDLKNLCTAAAYRPVKELIKQERLKDMEKNKNEAEGQTQKPLQVPKRIQMRKKRIRKMLKAKAQRLIQVLRRTKKIK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral955g00001 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 662 IPR027417 -
Pral955g00001 727 ProSitePatterns AAA-protein family signature. 586 605 IPR003960 GO:0005524|GO:0016887
Pral955g00001 727 Gene3D - 442 614 IPR027417 -
Pral955g00001 727 Coils Coil 667 687 - -
Pral955g00001 727 SMART AAA_5 479 616 IPR003593 GO:0016887
Pral955g00001 727 Gene3D - 615 687 - -
Pral955g00001 727 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 442 617 - -
Pral955g00001 727 Pfam ATPase family associated with various cellular activities (AAA) 483 613 IPR003959 GO:0005524|GO:0016887
Pral955g00001 727 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 698 - -
Pral955g00001 727 Pfam AAA+ lid domain 636 679 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral955g00001 Pral-Chr955 22430 28257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral955g00001 443 674 Calmodulin-binding Proteins AT3G56690 38.983 6.33e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral955g00001 - - pcin:129285842 951.814