Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral954g00007 ATGGATTCCGCAAGGAGCTGGTTGCAAAGGTTACAACCACGAGATAAAATGAGGTCATCGTTAAAGAAAAAGGAGGATAGTGCTGGAGTAGATTCAAATCAACCGGGAGATGATGAAGCTCTTTCCAGCACCACAAAACAGAAGGTTGCTGCCGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAGGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCCGATGCTGATGTCTCAGAGGAAGATCAAAACAACCTTCTTAAGTTCTTGGAGAAGAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACGATGATTGGAAAAGGTGCATTTGGCGAGGTCAGGGTCTGCAGGGAAAAGATGACAGCCAATGTATATGCGATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCGGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGTATAGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATTATGGAATATCTACCTGGGGGGGATATGATGACCCTTCTTATGAGAAAGGACACCTTGACTGAAGATGAAGCCAGATTTTATGTAGCTGAAACAGTTCTGGCTATTGAATCTATCCATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATCTGTTACTTGATAAATACGGACACTTGAAACTCTCAGATTTTGGACTATGTAAACCATTAGATTGTAGCACGCTTCAGGAAGATGATTTTTCAGTAGGTCAGAATGCAAATGGATCTACACAGAATGATGAACGCTCAGCTCCAAAACGCACACAACAAGAAAAACTACTACACTGGCAAAAGAACAGGAGAACACTTGCTTATTCTACTGTTGGCACACCTGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCGCTTGGAGCTATTATGTATGAAATGTTGGTGGGGTATCCTCCTTTTTATTCAGATGATCCAATGTCAACATGTAGAAAGATAGTTAATTGGAAATCTCACTTGAAGTTTCCAGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAACCACAGACTAGGGTCAAACGGTGCTCATGAAATAAAGGCTCATCCATTCTTCGGAGGTGTGGAATGGGATAAGCTATATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAGTCAGACATCCAGAATCACCAAGCATCAAGATCTGGGCCTTGGAGAAAGATGCTCTCGTCTAAGGACTTAAATTTTGTTGGGTACACATACAAGAATTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAGAAATCCTCCAAGTCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGGCGAGCCAGAAACATCAGATGCGCCTGCAGGCAATCAACCTGCTCAAGGGAGCTTTCTAAGCCTCTTGCCACCCCGTTTAGAGGCATCTCATAAAGACAAAGATACCTCCTAA 1653 0.4138 MDSARSWLQRLQPRDKMRSSLKKKEDSAGVDSNQPGDDEALSSTTKQKVAAAKQYIENHYKEQMKNLQERRERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKMTANVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLQEDDFSVGQNANGSTQNDERSAPKRTQQEKLLHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNHRLGSNGAHEIKAHPFFGGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEESDIQNHQASRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKSSKSKRPSIKSLFEGEPETSDAPAGNQPAQGSFLSLLPPRLEASHKDKDTS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral954g00007 550 MobiDBLite consensus disorder prediction 277 298 - -
Pral954g00007 550 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Pral954g00007 550 ProSiteProfiles Protein kinase domain profile. 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral954g00007 550 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Pral954g00007 550 MobiDBLite consensus disorder prediction 497 511 - -
Pral954g00007 550 MobiDBLite consensus disorder prediction 1 46 - -
Pral954g00007 550 Coils Coil 60 80 - -
Pral954g00007 550 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pral954g00007 550 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Pral954g00007 550 CDD STKc_NDR_like 116 480 - -
Pral954g00007 550 SMART serkin_6 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral954g00007 550 Gene3D Phosphorylase Kinase; domain 1 116 445 - -
Pral954g00007 550 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral954g00007 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Pral954g00007 550 MobiDBLite consensus disorder prediction 9 31 - -
Pral954g00007 550 MobiDBLite consensus disorder prediction 277 292 - -
Pral954g00007 550 MobiDBLite consensus disorder prediction 497 550 - -
Pral954g00007 550 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral954g00007 550 CDD MobB_NDR_LATS-like 52 113 - -
Pral954g00007 550 Gene3D Transferase(Phosphotransferase) domain 1 202 434 - -
Pral954g00007 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 468 - -
Pral954g00007 550 SUPERFAMILY Protein kinase-like (PK-like) 91 469 IPR011009 -
Pral954g00007 550 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral954g00007 550 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral954g00007 Pral-Chr954 20227 26732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral954g00007 1 541 AGC Kinase Gene Family AT4G14350 76.471 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pral954g00007 Pkinase 4.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral954g00007 K08790 - qsa:O6P43_006882 957.977