Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral954g00005 ATGGCCGACGGCGAAGGAGTTCCGAGGCAGAGAAGCGAAGATAAGGAAGAAGATGGAAATGAAGGCTGCAGTGGAATTAGAGTGCGAGGTATGCAATTCGCCTACGATGGGCAACCACCACTCTTTGTCGACTTCAACCTTAAAATCTGTACTGGATCGCGATGCCTTCTGGTTGGTGCCAATGGATCCGGGAAGACCACTTTGCTGAAAATTCTGGCTGGTAAGCATATGGTCGGAGGAAGGGATGTTGTACGGGTCTTAAATTGTTCTGCTTTCCACGATACCCAACTGGTTTGCGGTGGTGATCTCGCCTATTTGGGAGGATCCTGGAGTAAAACTGTTGGCTCAGCAGGAGAAATTCCACTCCAGGGAGACTTCTCAGCTGAACATATGATATTTGGGGTTGAGGGCACAGATCCTGAAAGGAGAGATAAGTTGATTGATTTGCTTGATATAGATCTACAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGCCGAGTGCAAATTTGCATGGGTCTTCTTCATCCATATAAGGTTCTCTTGCTGGATGAGGTTACTGTGGACCTAGACGTTGTTACTAGGATGGATTTGCTGGACTTCTTCAGGGAAGAATGTGAGCAGAGAGGAGCTACAATTGTATATGCAACTCATATATTTGATGGACTGGAGACATGGGCCACTCATCTAGCATACATACAAGACGGTGAGCTCAGGAGGGCAGAAAAGTTATCAGATATTGGTGAGTTGAAGTATTCGTCCAATCTGCTATCTGTTGTTGAATCATGGCTCCGTGCTGAGACAAAGCTTGAAAAGAAGAACCCTGTAAACCATGCTTCCAACGTCCAGAAGACTTCTTTTGGTAGTTCTCCTTTTATTTCATCAAGACACATGGCATACTATCGGTAG 912 0.4616 MADGEGVPRQRSEDKEEDGNEGCSGIRVRGMQFAYDGQPPLFVDFNLKICTGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTQLVCGGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPERRDKLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFREECEQRGATIVYATHIFDGLETWATHLAYIQDGELRRAEKLSDIGELKYSSNLLSVVESWLRAETKLEKKNPVNHASNVQKTSFGSSPFISSRHMAYYR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral954g00005 303 FunFam ABC transporter I family member 21 126 298 - -
Pral954g00005 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 246 IPR027417 -
Pral954g00005 303 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 26 261 - -
Pral954g00005 303 MobiDBLite consensus disorder prediction 1 22 - -
Pral954g00005 303 Pfam ABC transporter 44 76 IPR003439 GO:0005524
Pral954g00005 303 Gene3D - 24 277 IPR027417 -
Pral954g00005 303 SMART AAA_5 51 238 IPR003593 GO:0016887
Pral954g00005 303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 261 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral954g00005 Pral-Chr954 14680 17630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral954g00005 26 239 Calmodulin-binding Proteins AT2G36910 21.145 2.33e-08 53.5