Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral953g00009 ATGGCAGCAGCTCTGATCACAATCTGCCTTGGCATTTTCTACCTACGTAGGTGGAGGAAAGCAACTGAAGTTCAAGACAATCGGAGAAGCAGAGGGGAGAATGAACTTGGCGACTTAGAGTCCTTTGATAGGCATACCACTGTTAATGAGCTTAAAAATGATGTAAAGAAGGGGAATTTGAAAATTTTCAACTACGAATCAATTGCGGAAGCAACAAGCAGGTTCTCACCAGAAAACTTGCTAGGCAAAGGAGGCTTTGGACCTGTATATAAGGGATTATTGCCAAGGGGAGAAGAAATAGCCATAAAAAGACTTTCCAGAGGTTCGGCACAAGGAGTAATTGAGTTTAAAAATGAACTCATTGTGATATCTGAACTCCAGCACGTGAATCTTGTTCAGCTGTTAGGTTGCTGCATTCACAGAGAAGAGAGGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTAGACTTCTTTCTATTTGATTCTACTCGCAGCAAGTTGCTAGATTGGAAAAGGCGTTTCAACATAATTGAGGGGATCTCTCAAGGATTGCTCTATCTCCATAAATACTCAAGGCTAAAAGTAGTTCATAGAGATCTGAAGGCTAGCAATATTCTTCTTGATGGCAATATGAATCCTAAAATTGCAGATTTTGGTATGGCCAAGATTTTTACACAAGAATCAAATGTACAAACCAATCGGATTGTAGGGACATATGGATACATGTCACCCGAGTATGCCATGGAAGGAATTTTCTCTACTAAATCAGATGTCTATAGTTTTGGGGTTTTGCTACTTGAAATCATAAGTGGCAGAAGAAATAACAGTTTCTACAATTCCCAAGGTCCACTAAATCTAGTAGGGCATGCTTGGGAACAATGGAAAGAAGGTCAAGTTCTAGACATGGTTGATCCAACGTTAAGAGACCAATGTGATCCAGATCAAGTATTAAGATGTGTCCACATTGGACTTTTATGTGTCGAAGAAAATGCAGAAGATCGTCCAGCTTTGTCAGATGTTATAGCCTTGTTGGCAAGTGAAACTGCATCAATTCCTTTCCCAACGAGACCAGCATTTTATAGTGGAAGAAAGCTAAATAAGAAATATCATCCTGATGATTTTCAGACTCATTCAGTGAATGGCCTGTCTATTTCAACCATAAAAGCAAGATAA 1176 0.3937 MAAALITICLGIFYLRRWRKATEVQDNRRSRGENELGDLESFDRHTTVNELKNDVKKGNLKIFNYESIAEATSRFSPENLLGKGGFGPVYKGLLPRGEEIAIKRLSRGSAQGVIEFKNELIVISELQHVNLVQLLGCCIHREERMLIYEFMPNKSLDFFLFDSTRSKLLDWKRRFNIIEGISQGLLYLHKYSRLKVVHRDLKASNILLDGNMNPKIADFGMAKIFTQESNVQTNRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIISGRRNNSFYNSQGPLNLVGHAWEQWKEGQVLDMVDPTLRDQCDPDQVLRCVHIGLLCVEENAEDRPALSDVIALLASETASIPFPTRPAFYSGRKLNKKYHPDDFQTHSVNGLSISTIKAR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral953g00009 391 Gene3D Phosphorylase Kinase; domain 1 38 150 - -
Pral953g00009 391 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 40 150 - -
Pral953g00009 391 Gene3D Transferase(Phosphotransferase) domain 1 151 352 - -
Pral953g00009 391 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral953g00009 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Pral953g00009 391 SMART serkin_6 75 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral953g00009 391 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 388 - -
Pral953g00009 391 Pfam Protein tyrosine and serine/threonine kinase 79 344 IPR001245 GO:0004672|GO:0006468
Pral953g00009 391 SUPERFAMILY Protein kinase-like (PK-like) 60 361 IPR011009 -
Pral953g00009 391 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 151 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral953g00009 Pral-Chr953 38608 40722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral953g00009 53 360 Receptor kinase-like Gene Family AT4G23230 55.663 3.75e-127 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral953g00009 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral953g00009 - - qsa:O6P43_029362 496.508