Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral953g00008 ATGCTAACCTCTGAAAACCACAGGTTCTATCTTAAATTTGATTCAATTCAGCAGAACCCTAGCCTCACTTACCTTGTTATAGGCCGCAAAGACACTTCCTCTGAAGCTGAAGAAGACACCAACTATGGCTATAAGAGTTGGATTGCAAACAGAAACGACCCTATTTCCAACAATTCCGGGGTTCTTACTTTGGAGTATTCAGGTGCTCTCAAAATCAACCGCCAGAACAGGAAGCCAATAACTCTGTATTCTCCTGTCAAATCTGAAGTTACCAAAAATACCATTCTAACTCTATTAGATTCAGGAAACTTGGTCCTGCGGGAGCTGCATCCCAATGGTGTTTCAAAGAGTGTGTTGTGGCAGAGTTTTGACCATCCTTCAGATATACTACTTCCTGGTATGAAGTTAGGAATTAACCACAAAACTCATCAATCTTGGTCTGTTACAGCGTCCATTTCTGATGCAACCCCAGCTTCTGGTTCATTCACTCTCGAGTGGGATCCAAGAAAAAAGCAATTAATCATTAAGAGACAAGGGCAGATATATTGGGCAAGTGGGGTGGTGAAAAACAACAGATTTGTGAACATACCAGAAGAAGTTCAGCAGTTTTATGAATACAACATTGTCTCAACAGAGGAAGAAGAGTCCTTTAGTTTCAGAGGTAAATATGATGATGAATCACAGTGGGTGCTGTTTCATAATGGTCGGTTATTGGACACAAGAGAGAGTGATTTCCTCATTGCTAGTGCTGATACTTGCTATGGCTTTAACAGTGAAAGTGGCTGTCGAAAATCGAAACCACCCAACTGCAGAAAACCTGGTGAAAAATTCCAAATTCAGTTTGAATATATCGGTTCTCCATCTGGAAATGAGAGTTTTTCTGTGAGAGACGCAAACATCAGTATTGGTGAAGGTGATTGTATGGCTACTTGCTGGACCAACTGTACCTGCCTTGCGTTCAAAACGGCTTTCCTCAATGGAACTGGATGCATATATTACCATGGACATTGGAGGACAGTGCCTGTTGACTCTAGGGACGCAAGCATAAACGTCTTAATACCATCACCATATGACTCAGATCATAAAGATTTGAAGAAGTGGAAAATAATTGGTCCTACCATGGCAGCAGCTCTGATCACAATCTGCCTTGGCATTTTCTACCTAAGATGGAGGAAAGCAACTGAAGTTCAAGTTATTGTGTCATATCCGACAGACAATGGAAGAAGCAGGGAGGAGAATGAACGGGGCAACTTAGAGTCCTTTAATAGGCATACCACCGTTAATGAACTTAAAAATGATGTAAAGAAGGGGAATTTAAAAATTTTCAACTATGAATCAATCATGGAAGCAACAAACAGGTTCTCACCAGAAAACTTGCTAGGCAAAGGAGGATTTGGACATGTATATAAGGGATTATTGCCAATGGGAGAAGAAATAGCCATAAAAAGACTTTCCAGAGGTTCAGCACAAGGAGTAATTGAGTTTAAAAATGAACTCATTGTGATATCTGAACTCCAACACGTGAATCTTGTTCAGCTGTTAGGTTGCTGCATTCACGGAGAAGAGAGGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTAGACTACTTTCTATTTGGTGAGCAAACAAGTACTTTTCTTCCAAGGAAAATCTACAAGTTGCTAGATTGGAAAAAGCGTTTCAACATAATTGAGGGGATCTCTCAAGGATTGCTTTATCTCCATAAATACTCAAGACTAAAAGTAGTTCATAGAGATCTGAAAGCTAGTAACATTCTTCTTGATGGCAATATGAATCCTAAAATTGCAGATTTTGGTATGGCCAAGATTTTTACACAAGAATCAAATGTACAAACCAATCGGGTTGTAGGGACATATGGATACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTACTAAATCAGATGTCTATAGTTTTGGGGTTTTGCTACTTGAAATTATAAGCGGCAGAAGAAATAACAGTTTCTACAATTCCCAAGGTCCACTAAATCTAGTAGGGCATGCTTGGGAACAATGGAAAGAAGGTCAAGTTCTCGACATAGTTGATCCAATGTTGAGAGACCAATGTGATCCAGATCAAGTATTAAGATGTGTCCACATTGGACTTTTATGTGTCGAAGAAAATGCAGAAGATCGTCCAGCTTTGTCAGATGTTATAGCCTTGTTGGCAAGTGAAACTGCATCAATTCCTTTCCCAACAAGGCCAGCATTTTATAGTGGAAGAAAGCTAAATAAGAAATATAAGTCTGATGACTTTGAAACTCATTCAGTGAATGGTCTGTCTGTTTCAACCATAAAAGCAAGGTAA 2337 0.3954 MLTSENHRFYLKFDSIQQNPSLTYLVIGRKDTSSEAEEDTNYGYKSWIANRNDPISNNSGVLTLEYSGALKINRQNRKPITLYSPVKSEVTKNTILTLLDSGNLVLRELHPNGVSKSVLWQSFDHPSDILLPGMKLGINHKTHQSWSVTASISDATPASGSFTLEWDPRKKQLIIKRQGQIYWASGVVKNNRFVNIPEEVQQFYEYNIVSTEEEESFSFRGKYDDESQWVLFHNGRLLDTRESDFLIASADTCYGFNSESGCRKSKPPNCRKPGEKFQIQFEYIGSPSGNESFSVRDANISIGEGDCMATCWTNCTCLAFKTAFLNGTGCIYYHGHWRTVPVDSRDASINVLIPSPYDSDHKDLKKWKIIGPTMAAALITICLGIFYLRWRKATEVQVIVSYPTDNGRSREENERGNLESFNRHTTVNELKNDVKKGNLKIFNYESIMEATNRFSPENLLGKGGFGHVYKGLLPMGEEIAIKRLSRGSAQGVIEFKNELIVISELQHVNLVQLLGCCIHGEERMLIYEFMPNKSLDYFLFGEQTSTFLPRKIYKLLDWKKRFNIIEGISQGLLYLHKYSRLKVVHRDLKASNILLDGNMNPKIADFGMAKIFTQESNVQTNRVVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIISGRRNNSFYNSQGPLNLVGHAWEQWKEGQVLDIVDPMLRDQCDPDQVLRCVHIGLLCVEENAEDRPALSDVIALLASETASIPFPTRPAFYSGRKLNKKYKSDDFETHSVNGLSVSTIKAR 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral953g00008 778 PIRSF SRK 1 244 IPR024171 GO:0004674
Pral953g00008 778 PIRSF SRK 243 778 IPR024171 GO:0004674
Pral953g00008 778 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Pral953g00008 778 SUPERFAMILY Protein kinase-like (PK-like) 439 748 IPR011009 -
Pral953g00008 778 Gene3D Phosphorylase Kinase; domain 1 416 529 - -
Pral953g00008 778 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 103 754 - -
Pral953g00008 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 530 740 - -
Pral953g00008 778 SMART serkin_6 454 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral953g00008 778 FunFam Os08g0179000 protein 425 529 - -
Pral953g00008 778 CDD STKc_IRAK 460 732 - -
Pral953g00008 778 ProSiteProfiles Protein kinase domain profile. 454 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral953g00008 778 Pfam Protein tyrosine and serine/threonine kinase 458 731 IPR001245 GO:0004672|GO:0006468
Pral953g00008 778 Gene3D - 1 123 IPR036426 -
Pral953g00008 778 Pfam PAN-like domain 301 335 IPR003609 -
Pral953g00008 778 Pfam D-mannose binding lectin 47 150 IPR001480 -
Pral953g00008 778 ProSiteProfiles Bulb-type lectin domain profile. 1 119 IPR001480 -
Pral953g00008 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Pral953g00008 778 Gene3D Transferase(Phosphotransferase) domain 1 530 739 - -
Pral953g00008 778 SMART blect_4 1 126 IPR001480 -
Pral953g00008 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral953g00008 Pral-Chr953 31308 34484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral953g00008 432 747 Receptor kinase-like Gene Family AT4G23230 54.890 6.09e-120 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral953g00008 PK_Tyr_Ser-Thr 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral953g00008 - - qsa:O6P43_029362 796.964