Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral953g00003 ATGTCTTCTTCTATCACATTCATGCCATACCACAAGCACGCTCCTCCCATGGCCTCCTCCACCCTCTTGTCTTCTAACCCTAGGGTTTTCTCTTCATCCATCTCCGATCATCATCATCATTGCTGTCCTTTCTCTCAATCTCCCACCGTCCCCAAATCCTTCAGTGGCCTCTGCAAACCTTTCCATTCTCGGGTTCCCACTTCGATTCGCCGTCGAGGCTTCGTTGTCAAGGCTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACTGATTTCCAGAAGAAAGTCCTATATCTAGAGTCAATTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCAACCATCATCTCTGCCTCTCTTCCTAATATAAAATCCACTGTGGAATTCTTGACATCCATGGATTTCTCTGCAATTGAGTGCCGGCGCATTGTTGGCATGTGCCCTGAGATTCTCACATGCAGAGCATCAGATCTTTTACCTGTCTTCACCTTCCTGATCCGTGAAGCTCGAGTGAATGGATCAGATATCAAGCGTGTCATAAACCGTCGTCCCAGGTTGCTTGTCTGCAGTGTTACTGGGCAACTTCGTCCCACCCTGTACTTTCTCCAAAGCATTGGCATTGAAGAAGTAAACAAGCACACGTACTTGCTATCATGCAGTGTTGAAGAAAAGCTTATTCCCAGGATTGATTACTTTGAGAATATTGGATTTTCTCGCCGTGACGCAACTTCAATGTTTCGAAGATTTCCTCAGCTGTTCAACTATAGTATTAAGAACAATTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAGCTGAAAGAATTCCCCCAGTATTTCTCGTTTAGCTTAGAGGGTAGAATCAAACCTAGGCATAAATTGTGTTTAGAAATGGGGGTGTATTTTCCTCTCCCTGTATTATTAAAGACAAACGAAGCGCGATTTCGTAATAGATTAGATGTATGTGTAAATTCTTCTACACCCTTGAAAACATCTCCTTTATGGTGTTCAAATTGTGAAGTTAGTTAA 1068 0.4298 MSSSITFMPYHKHAPPMASSTLLSSNPRVFSSSISDHHHHCCPFSQSPTVPKSFSGLCKPFHSRVPTSIRRRGFVVKATVIKWRCPKQILPPNCDTDFQKKVLYLESIGIDSFSLIENHPTIISASLPNIKSTVEFLTSMDFSAIECRRIVGMCPEILTCRASDLLPVFTFLIREARVNGSDIKRVINRRPRLLVCSVTGQLRPTLYFLQSIGIEEVNKHTYLLSCSVEEKLIPRIDYFENIGFSRRDATSMFRRFPQLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLEGRIKPRHKLCLEMGVYFPLPVLLKTNEARFRNRLDVCVNSSTPLKTSPLWCSNCEVS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral953g00003 355 PANTHER CGI-12 PROTEIN-RELATED 104 333 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 Pfam mTERF 83 176 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 Pfam mTERF 181 328 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 Gene3D Transcription termination factor 3, mitochondrial 154 335 IPR038538 -
Pral953g00003 355 FunFam Transcription termination factor MTEF1, chloroplastic 172 336 - -
Pral953g00003 355 SMART mt_12 216 245 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 SMART mt_12 184 215 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 SMART mt_12 113 143 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Pral953g00003 355 SMART mt_12 250 282 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral953g00003 mTERF 6.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral953g00003 K15031 - gmx:100804440 516.153