Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral951g00001 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAACCCTCCCTCACCGAAGCGTCAAAAGGTTGAAAATGGAGGTCCGTCGGAGAAACCGAAGCCAGCAGCGGAGAATTCTAAAGAAGTAAGTACCCCTGAGCCGGCGGCTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGGTGATGGTCCGACTTCTGGCAAGAGTGATGCTGCAGCGGCTGTCGCCGTGGCGCTGCCGATCGGTGATGGGTCTTCGCCGACTTTGATGGTTGATAAGCCGAGGGGTTCTTTGTCTTCGTGGAATATATATCAGAAGCAAAGTCCAAGTTCTGAGACCCCGGCGCCTTGGTGCAGGCTCCTGTCGCAGTCTGCCCTGAACCAAAATGTTCCCATTGGCACACCCAACTTCACTATTGGTTCCAGTAGAAATTGCAACTTTCCATTGAAGGATCAGACTATAAGTGGGAATCTATGCAAGATTAAGCATACCCAGCGTGAGGGATGTGCTGTAGCCGTGCTAGAGAGTACGGGTAGCAAAGGATCTGTGCTAGTTAATGGGACACAAGTCAAGAAGAACAGCAGCTGTGTTCTTAACTCGGGCGATGAAGTGGTCTTTGGTTTGCTCGGAAATCATTCTTATATCTTTCAGCAGCTAAATGCTGACGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGCAGGGAAATTTCTGCAGCTTGAAAGGAGAACTGGAGACCCCTCAGCTGTGGCTGGGGCTTCCATTTTGGCTTCTCTTTCTAGCTTCAGACAAGATCACCCGAGATGGAAATCTCCGTCTCAGAATACCAATAAAGCTCATCAGGGCACTGATGTATCTGCTCATTCTGCTCATCATGATAATACAGAAACTGAGCTTGATGGTCCGGAAGGCAACTCAGCCCCAAATATCGAGAGTGATAAAGCAGCTGACGTTGGAGCAAGTGACAAGAATCATCCAATGGAATGCGATCCAGATGCTAGCATGGAGGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGCATCAACCTCGGGTATGTCTGTGCGCTGCGCGGTGTTTAAAGAAGATGTTCATGCTGCAATATTGGATGGAAAAGACATGAAAGTGTCATTTGACAACTTCCCATATTATTTGAGCGAGAACACAAAAAATGTCTTGGTTGCAGCTTGTTTTATTCACCTGAAGCACAAGGAACATGCAAAATACACAACAGATCTTACAACCATCAACCCGCGTATTTTACTTTCTGGACCTGCAGGGTCAGAAATATATCAGGAGATGCTGGCAAAAGCACTTGCTAATTACTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCATCCAAGGAAGCAGAGCTACTCAAAGATGGATTTCTTGTTGAAAAAACCTGCAGCTGCGCCAAGCAAAGTTCCACAGCCGCTGACTTGGCTAGGAACTTGGACCCATCAACTAGTGAAACAGATACGCCTAGCCCTTCAAATGCACCTACTTCATATGGCCTTGAACCTCAACCCAAAACTGAGACTGACGCCACTCTTTCCACTTCTGGGGCAACTAAAAATTGTTTGTTTAAACTAGGTGACAGGGTGAAATATAGCTGTTCATCTTCTGTTGGTTTGTATCAGACATCTTCAAGGGGCCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTATGTTTTGATGAGAATCCTTCGTCAAAAATTGGTGTAAGATTTGACAAGCCCATACCTGAAGGAGTTGATCTTGGAGGTGCCTGTGAGGCAGGTCAAGGATTTTTCTGCAATGTTAATGACCTTCGATTGGAGAACAGTGGTGTGGACGAGTTGGACAAATTACTTATCAATACTTTATTTGAGGTTGTTTATAGTGAGAGCAGAACTGCACCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATCCATTTTCATTTAAGAGTAGGCTTGAAAAGCTTCCAGACAATGTGGTTGTTATAGGTTCGCATACTCACACTGACAGTCGCAAAGAGAAGTCACATCCAGGGGGTTTGCTTTTTACAAAATTCGGCAGCAATCAGACTGCCCTTCTGGACTTGGCTTTCCCGGATAGCTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCGAACAAAACTTTGACTAAGCTTTTCCCTAATAAAGTTACAATTCACATGCCACAGGAAGAGGCACTTCTAGCATCTTGGAAGCAGCTTCTGGATCGAGATGCCGAGACTCTAAAAATCAAAGCAAATTTGCATCACCTGCGAACAGTTTTGAGTCGTTGTGGGATGGAATGTGAAGGACTTGAGACTCTGTGCATTAAAGACCAGGCGCTTACAAATGAAAAGAAGATCGTTGGTTGGGCTTTAAGCCACCATCTCATGCAGAACTCTGAAGCCGATCCTAATTCAAAGCTTGTATTGTCCTGTGAAAGCATCCAGCATGGAATTGGGATCTTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTGTTGGCTGATGTAATTCCTCCTAGTGACATTGGTGTTACTTTTGATGATATCGGAGCTCTTGAAAATGTCAAGGATACACTGAAAGAATTGGTCATGCTTCCTTTGCAAAGGCCAGAGCTTTTCTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGGCCCCCAGGAACAGGAAAGACAATGCTTGCAAAGGCCGTTGCCACTGAAGCTGGCGCTAACTTCATCAACATTTCCATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCCCTGGCCAGTAAAATTGCTCCTAGTGTCATATTTGTTGACGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGACACTGAGCGAATTCTTGTACTGGCAGCCACTAATAGGCCTTTTGATCTTGATGAGGCTGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCGGATTCTTCGAATAGAGCAAAGATATTGAAAGTTATACTAGCCAAAGAGGACTTATCTCCTGATGTTGACTTGGATGCAATTGCCAGTATGACTGACGGATATTCTGGAAGTGATCTCAAGAATCTTTGCGTGACTGCTGCACATCGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGCGTGCTGCTGCTCTCGCAGAAGGCAGACCTCCTCCGGCATTAAGTGGCAGTGCTGATATCCGGTCTTTAAACATGGAGGATTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCCTCTGAATCCGTAAATATGACTGAGCTCTTACAGTGGAATGAACTATATGGCGAAGGTGGTTCGAGAAGAAAGAAAGCCCTCAGCTATTTCATGTGA 3609 0.4516 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKVENGGPSEKPKPAAENSKEVSTPEPAADPGECDAQIAGDGTGDGPTSGKSDAAAAVAVALPIGDGSSPTLMVDKPRGSLSSWNIYQKQSPSSETPAPWCRLLSQSALNQNVPIGTPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVAVLESTGSKGSVLVNGTQVKKNSSCVLNSGDEVVFGLLGNHSYIFQQLNADVAVKGAEIQGGAGKFLQLERRTGDPSAVAGASILASLSSFRQDHPRWKSPSQNTNKAHQGTDVSAHSAHHDNTETELDGPEGNSAPNIESDKAADVGASDKNHPMECDPDASMEAGNVLEERNGTRDMLAASTSGMSVRCAVFKEDVHAAILDGKDMKVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKDGFLVEKTCSCAKQSSTAADLARNLDPSTSETDTPSPSNAPTSYGLEPQPKTETDATLSTSGATKNCLFKLGDRVKYSCSSSVGLYQTSSRGPSNGSRGKVVLCFDENPSSKIGVRFDKPIPEGVDLGGACEAGQGFFCNVNDLRLENSGVDELDKLLINTLFEVVYSESRTAPFILFMKDAEKSIVGNGDPFSFKSRLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVTIHMPQEEALLASWKQLLDRDAETLKIKANLHHLRTVLSRCGMECEGLETLCIKDQALTNEKKIVGWALSHHLMQNSEADPNSKLVLSCESIQHGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDSSNRAKILKVILAKEDLSPDVDLDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRPPPALSGSADIRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral951g00001 1202 CDD FHA 132 230 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 508 544 - -
Pral951g00001 1202 Pfam AAA+ lid domain 1091 1126 IPR041569 -
Pral951g00001 1202 Gene3D - 1070 1164 - -
Pral951g00001 1202 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 378 1201 - -
Pral951g00001 1202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1178 IPR027417 -
Pral951g00001 1202 ProSitePatterns AAA-protein family signature. 1041 1060 IPR003960 GO:0005524|GO:0016887
Pral951g00001 1202 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 896 1072 - -
Pral951g00001 1202 CDD RecA-like_ATAD1 901 1067 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 276 346 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 329 343 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 1 26 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 276 297 - -
Pral951g00001 1202 Pfam FHA domain 151 220 IPR000253 GO:0005515
Pral951g00001 1202 Gene3D - 896 1177 IPR027417 -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 298 312 - -
Pral951g00001 1202 MobiDBLite consensus disorder prediction 1 82 - -
Pral951g00001 1202 Pfam ATPase family associated with various cellular activities (AAA) 938 1067 IPR003959 GO:0005524|GO:0016887
Pral951g00001 1202 Coils Coil 858 878 - -
Pral951g00001 1202 SMART AAA_5 934 1071 IPR003593 GO:0016887
Pral951g00001 1202 Gene3D - 129 238 - -
Pral951g00001 1202 SUPERFAMILY SMAD/FHA domain 113 226 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral951g00001 Pral-Chr951 7853 18709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral951g00001 897 1149 Calmodulin-binding Proteins AT3G56690 40.000 3.54e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral951g00001 - - gmx:100778164 1868.97