Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral950g00001 ATGTCTTCCTTGGCCTCTTCATCCTCTGAACCCAAATTGACCTTCGAATACGATGTCTTCTTAACTTTCAATGGTCTTGCAGATGGGGTAAGAACCTTTCTTGAGGATTGTTTAAGGAACGCTGGATTCAAAACTTTCATTCATGACATGGTCAGGGATTATTCCACATGGGAGATGATGGAAAGGTGTAGAATTGTGGTGGTGGTAATCACACCAGACTTTGTTTGGTCCGGCAAATGTCTTGAGATACTTCTGAATTTAATGTCTGGTCCCAAAACAGTGTTGCCTTTCTTCAATGGAATGAGCAAGAATGAAGCGCGTGTGCAGTTCGAGAGCTTCCATTTGCGAAGATATGAGAACGAAGTGAGTTACTACGAACTGAATTTGCATATGCGAAGATTTGAGAATGAATTGAGTGTGCTGTTGGAGATTTTGCATTTGCCAAGGTCTAATGATGATTATATCTTCGATTGGGACTTCCAACCAAGAGCCGACGCTGTGTGTGATTCGCTACATGGCTTCTCACTGACGGATGATTTTGGGGACCAAGAATTGGTCAATAACCTTATTGCAAAAGCCATATCACAAGTAGGGTTGCTACCTCGTGTGAGACAAGTGCTTGACCGATTAGGCTGGAAATCCCATCATGTAGAAAATACAATCATAGTCGGAATTTGGGGGGTTGGAGGTGTCGGCAAAACTACCATTGCCAGAGCTATTTATGATACAATTGGTATCCATTTCAATTGCAAAAGTTTCCTTGCTAATATCAAGGATGCATGGGAGAAAAATAATGGTCAAGTTCTTCTACAAGAGCAACTTCTTTCAGATATTCATGTGAATCATATGAGGCAAGGACCTTATAGAGGGGCCCTAATAGTACTTGATGATGTAAATCAAGTAGGCCAACTCACTGAACTGTGTGGAAATGGAGAGCAGTTTGGTAAAGGGAGCTTGATTTTTGTCACAACAAGAAATAAGGATTTACTTGATCACTTTGTTGACAAATCATGCAAAGTGGAAAAGTTGGATGACAGTGAGTCTCTTCAGCTTTTTGGTTGGCATGCATTTGAAAACATTGATCCAACAAATGGTTTTGTGAATCTTTCTAGGAAAGTAATTACTTTATGTGAAGGGCTACCATTGATTCTTGAAGTTGTAGGCTCTCTTTTGCGTAATAAGACAAAATCGGAGTGGAAAAAAGTATTGAATAAATTAAAAAATGTTTCGAGTGGTGAAATACAACAGAAGCTTAAAATAAGCCTAGACTTTTTGGCTGAATCAGAGAATAAATTATTTTGTGATATAGCATGCTTTCATGTGGGCCAGAGTATGAGTTATGTTACTGATTTGTTTAAGGGCTCGAGATTCCCCATAGAAATGGGAATGCAAGTACTTATGGAGCGCAACCTTGTACAGGTTGTCAATGACAAGATTCATGTGCATGATTTGCTACAAGAGATAGGGAGGGGAATGGCTACAAAAAGGCCAAAGTTCAAATATACCTATGATGTATTCTTAAGTTTTAGAGGTGAAGATACGCGTAAATCATTTACTACTCATCTTTATAATGCTCTAAAGCAAGCAGGAATTGAGGTCTTCATGGATGATGAAAGGATTGCAAAGGGAGAACATATTCCAAGTTCATTACTACAAGCAATTGAACATTCTAGAATTTCAATCATTATATTCTCACAAAATTATGCTGGCTCTAGTTGGTGCTTGCAAGAATTAGAGAAAATCATGGAGTGCTACAAAACAACTCAACAAGAGGTTTTTCCTCTATTCTATGATGTGCAACCATCTGAAGTTCGTAAACAGCAGAATGCCTTTGGAAAAGCATGGGAAAGGCTTATAACGACATTCCCGATCAGAAAAGGTAGGAAATTGGCAATCAATTTGAAGAGAGTCCTTAATGAGGCTGCTAACTTATCAGGGTGGGATATGCAAAAATACAGAACTGAGGCTGAGTTACTTGATGATATTGTTAAAACTGTCACAATGAGGCTAGACAACAGCAAATACATGTTTGTTGCTCACCATCCAGTGGGTTTGGATTCTCGAGTGCAAGATATCATCCAATTGCTAAGTTGTGAATCAAATGAGATTATCATAATTGGAATTTGGGGGATGGGTGGGGTGGGTAAGACGACGATGGCTAAAGCTATTTACAATGAAATGGGCCAAAGTTTTGTGGGAAAGAGTTTCCTTGCAAATATTAGGGAAGTATGGAAGCATGATAATGGTCAAGTCTATTTGCAAGAGCAACTTCTTTCTAGCATCTTGAAAACAAGAAGAATCAATATACCAAATGTAGGATTGGGAAAATCTCTAATCAAGGAAATTCTTTGTCAAAAAAGAGTATTCATTGTATTAGATAATGTGGATCATGAAGACCAGCTCAAAGTTTTATGTGAGAGACGTGAATGGTTTGGACAAGGCAGTAGAATAATTGTCACTACTAGAGATGAACGTCTGCTTCAAATCCTTCAAGTGAATAAAGTATTCAATGTGAGGGGAATGGATGATAATGAATCTATTGAACTTTTCAGTTGGCATGCTTTTAAGCAAGCACTTCCTGAAAGAAATTTTAATGAACTTTCAAGAAGGGTAGTATCATACTCAGGAGGCCTACCACTAGCTCTTGAGATCCTTGGCTCATATTTGTTTGATAGGGAAATACCTTATTGGGAAAGCGCTTTGAATAAATTGGAACAAATTCCAAATGGTAAAATACATGAAATTCTAAAAATAAGTTATGATGGTTTGAGTGACCAAATAGAGCAAGAGCTATTCTTGGACATATGTTGTTTCTTCATTGGGAAGGATAGAAGCTATGCTACTCAAGTATTAGATGGTTGTGGACTTCATGCAAAAGTTGGAATTACCCACCTAATCGAGCGAAGCCTTGTAAAAGTTGTAAAGTTTGGAAATAAAAATATATTTGATATGCATGACTTAATACGTGATATGGGAAGAGAAATAGTTCGTGAGCAATCGCCAAGGAAGCTAGAGAAGCGTACAAGATTGTGGTCTAAGGATGATGTGTTGAATGTGTTAGAAAATAACATTGGAACAATGACTATTAAGGGGTTGTCTTTAAACATGCCAAGAAATAATTTAGTATCCTTGAGTACCAAGGCATTTGAGAATATGAAGAGGATTCTTCTACTCAACTTTGATCATGTACAGCTTAACGGAGACTATGGTTGTCTATCAAAAGAATTGAGATGGCTTTGTTGGCATAACTCTCTCTTAGAAAACTTGCCAACGGACTTCAATCTAGAAAAGACAGTTGCCATTGACTTAAAGTGGAGTAATCTCACAAAAGTATGGCTGAAAAACCAGCTCCCAAAAGGTATATATGACTTGAAGTCATTGAGAACTCTCAATCTTTTTGGTTGCTCCAAGATTGAAAGGTTGGATGAAGACATTGAGAAAATGGAATCCTTAATGATTTTGGGAGCCAGTCACACTGCTATAACACAA 3489 0.3789 MSSLASSSSEPKLTFEYDVFLTFNGLADGVRTFLEDCLRNAGFKTFIHDMVRDYSTWEMMERCRIVVVVITPDFVWSGKCLEILLNLMSGPKTVLPFFNGMSKNEARVQFESFHLRRYENEVSYYELNLHMRRFENELSVLLEILHLPRSNDDYIFDWDFQPRADAVCDSLHGFSLTDDFGDQELVNNLIAKAISQVGLLPRVRQVLDRLGWKSHHVENTIIVGIWGVGGVGKTTIARAIYDTIGIHFNCKSFLANIKDAWEKNNGQVLLQEQLLSDIHVNHMRQGPYRGALIVLDDVNQVGQLTELCGNGEQFGKGSLIFVTTRNKDLLDHFVDKSCKVEKLDDSESLQLFGWHAFENIDPTNGFVNLSRKVITLCEGLPLILEVVGSLLRNKTKSEWKKVLNKLKNVSSGEIQQKLKISLDFLAESENKLFCDIACFHVGQSMSYVTDLFKGSRFPIEMGMQVLMERNLVQVVNDKIHVHDLLQEIGRGMATKRPKFKYTYDVFLSFRGEDTRKSFTTHLYNALKQAGIEVFMDDERIAKGEHIPSSLLQAIEHSRISIIIFSQNYAGSSWCLQELEKIMECYKTTQQEVFPLFYDVQPSEVRKQQNAFGKAWERLITTFPIRKGRKLAINLKRVLNEAANLSGWDMQKYRTEAELLDDIVKTVTMRLDNSKYMFVAHHPVGLDSRVQDIIQLLSCESNEIIIIGIWGMGGVGKTTMAKAIYNEMGQSFVGKSFLANIREVWKHDNGQVYLQEQLLSSILKTRRINIPNVGLGKSLIKEILCQKRVFIVLDNVDHEDQLKVLCERREWFGQGSRIIVTTRDERLLQILQVNKVFNVRGMDDNESIELFSWHAFKQALPERNFNELSRRVVSYSGGLPLALEILGSYLFDREIPYWESALNKLEQIPNGKIHEILKISYDGLSDQIEQELFLDICCFFIGKDRSYATQVLDGCGLHAKVGITHLIERSLVKVVKFGNKNIFDMHDLIRDMGREIVREQSPRKLEKRTRLWSKDDVLNVLENNIGTMTIKGLSLNMPRNNLVSLSTKAFENMKRILLLNFDHVQLNGDYGCLSKELRWLCWHNSLLENLPTDFNLEKTVAIDLKWSNLTKVWLKNQLPKGIYDLKSLRTLNLFGCSKIERLDEDIEKMESLMILGASHTAITQ 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral950g00001 1163 Gene3D - 497 668 IPR035897 -
Pral950g00001 1163 SUPERFAMILY Toll/Interleukin receptor TIR domain 498 647 IPR035897 -
Pral950g00001 1163 Gene3D - 342 426 IPR042197 -
Pral950g00001 1163 Gene3D - 841 924 IPR042197 -
Pral950g00001 1163 ProSiteProfiles TIR domain profile. 15 142 IPR000157 GO:0007165
Pral950g00001 1163 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 503 1148 IPR044974 GO:0006952
Pral950g00001 1163 Pfam NB-ARC domain 688 921 IPR002182 GO:0043531
Pral950g00001 1163 Pfam NB-ARC domain 205 423 IPR002182 GO:0043531
Pral950g00001 1163 FunFam Disease resistance protein (TIR-NBS-LRR class) 500 672 - -
Pral950g00001 1163 SUPERFAMILY L domain-like 1033 1162 - -
Pral950g00001 1163 Gene3D Ribonuclease Inhibitor 958 1163 IPR032675 -
Pral950g00001 1163 Pfam TIR domain 503 666 IPR000157 GO:0007165
Pral950g00001 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 436 IPR027417 -
Pral950g00001 1163 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 119 IPR035897 -
Pral950g00001 1163 SMART till_3 502 644 IPR000157 GO:0007165
Pral950g00001 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 935 IPR027417 -
Pral950g00001 1163 Gene3D - 1 129 IPR035897 -
Pral950g00001 1163 SUPERFAMILY "Winged helix" DNA-binding domain 911 1021 IPR036390 -
Pral950g00001 1163 Gene3D - 669 835 IPR027417 -
Pral950g00001 1163 Gene3D - 179 341 IPR027417 -
Pral950g00001 1163 SMART AAA_5 702 842 IPR003593 GO:0016887
Pral950g00001 1163 SMART AAA_5 219 344 IPR003593 GO:0016887
Pral950g00001 1163 ProSiteProfiles TIR domain profile. 501 670 IPR000157 GO:0007165
Pral950g00001 1163 PRINTS Disease resistance protein signature 782 796 - -
Pral950g00001 1163 PRINTS Disease resistance protein signature 1122 1138 - -
Pral950g00001 1163 PRINTS Disease resistance protein signature 875 889 - -
Pral950g00001 1163 PRINTS Disease resistance protein signature 705 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral950g00001 Pral-Chr950 27544 35625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral950g00001 223 495 WRKY Transcription Factor Family AT5G45050 31.010 8.02e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral950g00001 - - pcin:129288830 1278.46