Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral949g00003 ATGGCTCTGAAGAAGCCCAGCAGACTCCCTCAGACCGCAGTTCTGAAGCAAATTCTAAAGAGATGCTCGAGCTTGGGGAGGAAACGAGGGTATGTTGAAGAAGGCTTGCCTATGGACGTGCCCAAGGGTCACTTTGTTATATATGTGGGAGAAAACAGAAGTAGATACGTTGTCCCAATTTCATTTCTAAGCCGCCCTGAGTTCCAAAGCCTTCTCCTTCAAGCCGAAGAAGAGTTCGGGTTTGATCACGACAGGGGACTCACAATCCCTTGTGAGGAAGACGCCTTTGAGTCCCTCACCTCCACTCTTAGATGA 315 0.4921 MALKKPSRLPQTAVLKQILKRCSSLGRKRGYVEEGLPMDVPKGHFVIYVGENRSRYVVPISFLSRPEFQSLLLQAEEEFGFDHDRGLTIPCEEDAFESLTSTLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral949g00003 104 Pfam Auxin responsive protein 17 102 IPR003676 GO:0009733
Pral949g00003 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral949g00003 Pral-Chr949 29309 30148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral949g00003 37 99 Calmodulin-binding Proteins AT3G43120 52.381 8.52e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral949g00003 K14488 - egr:104448825 178.333