Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral948g00007 ATGAAGGTGAAGGCTGACAGAGATGAATCTTCCCCTTATGCTGCCATGCTTGCAGCACAGGATGTATCTGCTAGATGCAAGGAGCTGGGCATAACTGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAAACACCAGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGATCAGGAATGAAAATTGGTCGTATAGAGGATGTGACTCCGATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAA 279 0.4982 MKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral948g00007 92 ProSitePatterns Ribosomal protein S11 signature. 57 79 IPR018102 -
Pral948g00007 92 Pfam Ribosomal protein S11 1 88 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pral948g00007 92 Gene3D Ribosomal protein S11 1 92 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pral948g00007 92 FunFam 40S ribosomal protein S14 1 92 - -
Pral948g00007 92 SUPERFAMILY Translational machinery components 3 88 - -
Pral948g00007 92 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 87 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pral948g00007 92 MobiDBLite consensus disorder prediction 72 92 - -
Pral948g00007 92 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 89 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral948g00007 Pral-Chr948 35066 36761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral948g00007 1 81 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 93.827 1.99e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral948g00007 K02955 - gmx:100780604 152.91