Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral948g00001 ATGGTTTCCCAAAATCAACCCAAAGAAGACAACCCTAAGAAGCAATGGTCCTTGAGAGACTTCGAGATCGGAAAACCCCTAGGAAAAGGGAAATTTGGTAGAGTCTACGTCGCTCGAGAAGTCAAGAGCAAATATATTGTGGCACTTAAGGTTATTTTTAAGGAACAAATAGAAAAGTACAGAATTCATCACCAACTGAGGAGAGAGATGGAGATTCAGACCAGTCTTCAGCACCCCAACATTCTCCGTCTCTATGGCTGGTTTCATGATGCCGAACGGGTTTTCTTGATACTTGAGTATGCTCATAACGGTGAGCTTTACAAAGAGCTCAGAAAAAAAGGTCATCTCACCGAGAAGCAAGCAGCCACGTATATTTTGAGCCTCACAAAGGCGTTGGCATATTGTCATGAGAAGCATGTCATTCATAGGGATATAAAGCCCGAGAATTTGTTGCTTGACCATGAGGGTCGCCTTAAAATTGCAGATTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACATACTATGTGTGGAACATTGGATTATCTAGCACCTGAAATGGTAGAAAACAAAGAACATGATTTTTCTGTTGATAACTGGACTTTGGGTATACTTTGCTATGAATTCTTATATGGTTCTCCCCCATTTGAGGCTGAGAGTCAAGTTGACACTTTCAAGAGGATAATGAAGATTGACCTAAATTTCCCTTCTACTCCAACTGTTTCTTCAGAAGCCAAAAATCTGATTAGCCGGCTCTTGGTGAAAGATTCCACGAGAAGGCTATCACTTCAGAAGATTATGGAGCATCCTTGGATAGTCAAGAATGCTGATCCTATGGGTATCTGCAATAAATAG 855 0.4105 MVSQNQPKEDNPKKQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYIVALKVIFKEQIEKYRIHHQLRREMEIQTSLQHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKKGHLTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDFSVDNWTLGILCYEFLYGSPPFEAESQVDTFKRIMKIDLNFPSTPTVSSEAKNLISRLLVKDSTRRLSLQKIMEHPWIVKNADPMGICNK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral948g00001 284 PIRSF ILK 1 272 - -
Pral948g00001 284 FunFam Serine/threonine-protein kinase ark1 13 283 - -
Pral948g00001 284 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral948g00001 284 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Pral948g00001 284 FunFam Aurora kinase A 13 104 - -
Pral948g00001 284 SUPERFAMILY Protein kinase-like (PK-like) 13 276 IPR011009 -
Pral948g00001 284 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Pral948g00001 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pral948g00001 284 CDD STKc_Aurora 20 273 - -
Pral948g00001 284 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral948g00001 284 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 282 IPR030616 GO:0004672
Pral948g00001 284 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral948g00001 284 Gene3D Transferase(Phosphotransferase) domain 1 105 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral948g00001 Pral-Chr948 2821 6049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral948g00001 21 278 CBL-interacting serine-threonine protein kinases AT5G10930 40.755 3.39e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pral948g00001 Pkinase 2.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral948g00001 K08850 - qsa:O6P43_027118 530.406