Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00177 ATGGTTTCGCTTCGTTCCCCTGTTTCTCCTCTTCCCTCTGTTTCCTCTTCTTCTTCTTGTTTCTTCGGCAGCTTCTTCTCTTTCTGTTGTGCCCCTAAACCCAGAAACGACTCGATAATCGTGCTGAAACGCCCTTCAGTTGTCAAAGCCTCGTGGCAAGAGCTTGCTGGAGTGTTGTTGTTCTCGGCGATTCCTTTCAGTGCTGTAAAAGTTTTAGCTAATAGTCCACTAGGGCGCTCGCTTCAGAGGAGAATGCAGGCGAGAAAGAAAATTGCTCTAGATGACTCGTCCATATACAAGACTTTAGCCCAGAAGGCCAGAAAAGAGAGCCCTTGGTATGGAGAAGATCGGCCTCATTGGCTTGGTCCTATTCCATATGATTGTCCGGATTATCTTACCGGGGAACTTCCTGGGGATTATGGATTTGACATTGCCGGGCTTGGCAAGGATCCCGTAGCTTTGGAGAAATACTTCAACTTCGAGATATTGCATGCTCGTTGGGCTATGCTTGCATCAGTTGGTGCTCTGGTTCCTGAAGTACTAGACCTATTTGGGGCCTTTCACTTTGTTGAACCCATCTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTTGACTACCTTGGAATCCCGGGACTTCACTTAGCTGGAAGCCAAGGAGTGATCGTAATTGCTATTTGCCAGGCACTCCTCATGGTTGGACCAGAATATGCTAGATATTGTGGGATTGAAGCATTGGAACCTCTGGGAATTTATCTGCCTGGCGACATAAATTATCCTGGAGGAGGATTGTTTGATCCCCTGAATCTGTCCAAAGATCCTGCAGCTTTCGAGGAGCTGAAGGTTAAAGAAATAAAAAATGGACGCTTAGCAATGATTGCCTGGTTAGGATTTTACGCTCAAGCAGCTCTGACGGGTAAAGGTCCTGTGCAGAACCTACTTGATCACGTCTCTGATCCTTTCCACAATAATCTTCTGACCGCGCTCAGCTTAGTGAATGTATTTACGTCATCCAGCTTTGTATAA 1032 0.4651 MVSLRSPVSPLPSVSSSSSCFFGSFFSFCCAPKPRNDSIIVLKRPSVVKASWQELAGVLLFSAIPFSAVKVLANSPLGRSLQRRMQARKKIALDDSSIYKTLAQKARKESPWYGEDRPHWLGPIPYDCPDYLTGELPGDYGFDIAGLGKDPVALEKYFNFEILHARWAMLASVGALVPEVLDLFGAFHFVEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGGLFDPLNLSKDPAAFEELKVKEIKNGRLAMIAWLGFYAQAALTGKGPVQNLLDHVSDPFHNNLLTALSLVNVFTSSSFV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00177 343 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 88 329 IPR001344 GO:0009765|GO:0016020
Pral943g00177 343 Pfam Chlorophyll A-B binding protein 129 304 IPR022796 -
Pral943g00177 343 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pral943g00177 343 FunFam Chlorophyll a-b binding protein, chloroplastic 119 331 - -
Pral943g00177 343 SUPERFAMILY Chlorophyll a-b binding protein 111 331 - -
Pral943g00177 343 Gene3D Chlorophyll a/b binding protein domain 119 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00177 Pral-Chr943 918675 922438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00177 33 332 Chloroplast and Mitochondria Gene Families AT1G76570 77.000 4.93e-177 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00177 K14172 - jre:109007729 522.702