Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00167 ATGTCGGGATCAGAGACAGGAGTGATGGCCAGTAGGGAGCCCTTCAACGTGGGGCATCAGAATAGTCCGGCACCATCACAACCGGTCTTGCAAAACACGCGCATGTCCTACAATGCTGATGGCACAACTGAGTACAAGCATCTTGCTGCTATTTCCCCACCAACTTATCACTCCTCAACCGCTGTCACTGGCACTATTGTTAACGGCACCGATGCCGGACAAGGGGGCGAAGCATCGGGAATCAATGTCAACATGGTCAATGAGCCTTTGAAGAGGAAGAGAGGGAGGCCGAGGAAATACAGGCCAGATGACGCCATGGCGCTCGTCTCGGCGCCCAAACCTCCCGCGCTTTCCGTGAACCAGTCCAGTGGAGGATCTGCGTCACCCACTTCCACGTCCCTGAAGAAAGTCAGAGGCAGACCTCCCGGTTCCAGCAAGAAGCACCAGTTGGAGGCTCTAGGACCAGCTGGAGTTGGATTTACACCACATGTTATTACTGTAAAAGCTGGAGAGGATGTATCATCAAAAATTATGTCCTTTTCTCAGCATGGTTCAAGGGCTGTATGCATCCTCTCAGCAAATGGAGCCATATCTAATGTGACGCTGCGTCAAGCTGCCACATCTGGTGGAACTGTGACTTACGAGGGACGCTTTGAGATCCTATCACTATCTGGTTCTTTTCTTGTATCTGAACATGGTAGTCAGTGGAGTAGAACTGGTGGATTAAGCGTATCCTTGTCTGGACCAGATGGCCGTGTTTTAGGTGGGGGAGTTGCTGGACTTTTGACAGCTGCTTCACCTGTGCAGGGAGCTTCATTGCAGATGGTGGGAAGGCATCAAAGTCAGCAAACCAATTGGAAATATTATCCGCCCCACCAAAGTTGGCCCCAAGCAGTGGTCCAGTGGGGCAGAGCAGCTCCCCATCACGGGGCACTCATAGTGAATCGTCAGGAGGCCCCGGGAGCCCACTTAACCCAAGCAGAGGAGCAGCCTGCAGTAGCAGTAAACTACAAGGCATTTCATGCATGCCGTGGAAATGAAAAAAAAAATTCATATCATTAA 1062 0.5141 MSGSETGVMASREPFNVGHQNSPAPSQPVLQNTRMSYNADGTTEYKHLAAISPPTYHSSTAVTGTIVNGTDAGQGGEASGINVNMVNEPLKRKRGRPRKYRPDDAMALVSAPKPPALSVNQSSGGSASPTSTSLKKVRGRPPGSSKKHQLEALGPAGVGFTPHVITVKAGEDVSSKIMSFSQHGSRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLVSEHGSQWSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQGASLQMVGRHQSQQTNWKYYPPHQSWPQAVVQWGRAAPHHGALIVNRQEAPGAHLTQAEEQPAVAVNYKAFHACRGNEKKNSYH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00167 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 46 270 IPR039605 GO:0003680
Pral943g00167 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 162 269 IPR005175 -
Pral943g00167 353 MobiDBLite consensus disorder prediction 115 138 - -
Pral943g00167 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 269 - -
Pral943g00167 353 Gene3D - 162 287 - -
Pral943g00167 353 CDD DUF296 161 264 IPR005175 -
Pral943g00167 353 SMART AT_hook_2 91 103 IPR017956 GO:0003677
Pral943g00167 353 SMART AT_hook_2 135 147 IPR017956 GO:0003677
Pral943g00167 353 MobiDBLite consensus disorder prediction 1 30 - -
Pral943g00167 353 ProSiteProfiles PPC domain profile profile. 156 301 IPR005175 -
Pral943g00167 353 MobiDBLite consensus disorder prediction 72 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00167 Pral-Chr943 880285 885929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00167 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 55.872 1.20e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00167 - - zju:107419841 345.51