Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00130 ATGGCAGGCCAGAGCTCTAACGATGGTCCCAGTGCCAGTAATGTTTCAGTTGAATTGTCTGATTCAACTGTTCAGCTCAATATCAAGACTTTAGATTCCCAAATTTACACTTTTCAAGTGGACAAAAACATGCTAGTTTCATTGTTGAAGGAGAAAATAGCCAATGAAGTGGGTGTTCCAGTGGGTCAGCAGCGGTTAATATTCAGGGGGAAGGTCTTGAATGATAATCATGTTCTTTCTGAGTATCACATTGAGAATGGGGATACACTGCATTTAGTTCAAAGGCAACTGAACCAGTCACAGGCTCCTGGTACCAGTTCTGGTGAGACAACTGGTACAAGTGGAAACCGAGATGCAAGCTCTGGAGCGCTTCATAATCGTGTTGGGCAAATTTCACACAGTGTTGTTCTGGGAACCTTTAATGTGGGGGAGCAAGGTGAAGGAATTGTTCCTGATCTTAGTCGGGTCATTGGGGCGGTCTTGAACTCTATTGGAATTGGTGGGCAGAGCACTGGCGGTGTTGCAAATGGTACACAGTCTTCTTCTTCATCAAATCCATCTGCTCAGGGTCCTTCTGGGAATGAAGCTGGAGGGACGCATCTTGAAAGTCAGAACCAATCAGGAAATCAAGCTCAGACTGGACAGACATTTCCTAACCAACCATTCCAATCTTTACCTCAAGCATTTCAGATTCCTCTGGCTGCGGGATCATTAACTGTGCCATCACTTAGTGCTCCAATTCCTCATTCGCTGGATACTCTTTCTGAGTTTATAAATCGCATGGAGCAGGCACTATCACAAAATGGTTATCAAACAAATTCATCTTCAATGAGTGGAGGAGAGCAAACACGTGTGGAATTACCCTCCAACCCGCAAGGGTTGCCAACAGTTGAAGCATTAAGTGTTGTCCTGCATCGTGCTGAACAGCTGCTCAGTGGTCATGCCATTGCTGCACTATCTCATATTGCAGGACGCTTGGAGAGAGAGGGAACTACTTCTGATCCCAATATAAGGGGTCAAATACAGTCTGAGTCTATGCAACTAGGACTTGCCATGCAGCATTTGGGTGCATTTCTACTTGAGCTTGGCCGTACAATCCTGACGCTGCGTATGGGACAGTCTTCTGCAGAGTCTGCTATCAATGCTGGGCCTGCGGTTTATATTTCTCCATCAGGACCTAATCCTATAATGGTGCAGCCTTTCCCACTTCAAACAAGCTCCCTGTTTGGTAGTTCTGTTCCTTCTTCATCTCCGGCAACATTTGGTACAGTTGGTGTTGGAAGTGCACCTCGGAATGTAAACATCCATATACATGCAGGTACTCCTCTTGCACCGATTGTTTCGGCAATTGGTTCTAGGGCAAATAATGGGGAAGGGGCACCACCAAATGAACGTCGTAATGCTCCTGGCTCTGGTGATTTAGGTTCAATGCGTGCTTTACCCGTGAGAAACATCATTGCAGCAGCTGTACCAGCATACCCTGCTGGTACTGGGACCAGTAGTGGCACGCAATCCAGTGGTGTTTCTACTTCACAACTGCCTTCTGATTCAATTGCATTATCATCTGTTATTGCTGATATCAATTCTCGTGCTAGAAACATTTTAGGAAATATGCAAGGGGATAGTACAGTTCTGTCAGGTCGAGTGGAGTCAACTAATCGGGACTTGCCTGTCAGAAGGGAATCACGACCTACTCCTGGTAATGAACAGCTAGATGCCGTGGAGGTAAACGCTGTTGAAGCTTCCAGTGTGTCTTCATTTGCTTGCTCATCTGAAAGTGGAATACGTCAGCCCCAGCCTGAGGCCGCCCAAACTTCTAACAATGAGGAGAGAGATATTTTGAGCAACACATTTGGTTCAACTTCTTCCAATCAAGATTCATTAAGTTGGTCAAGGGGAGAAAAAATAGGAAAGCCGGAAAATGTACAAGAAAATGCTCAATCTGCTGGTGAAAAACGTGCAACTGAAAGCACCAAAGCTGTTCCTCTTGGACTGGGTATGAGTGGCTTGGAGCGTAAGAGGAGAACGGGACCGCAACAACCTGTAAGTGGAGGTGCTGATGATGGATCAGCCAGTTCTTCAGGTAATCAAAATCAGGAATCCAGGACAAGTGGTCTTAATATTTTGCAAGCTCTTGCAAGTCATGGAACTTCTAGGAACCAGGGAAATGCTAATGGTCCTTCCCAAGTGCCCGCTTCCTCTGGTGATGGCCAGATTGATATGGCAGGTGTTATGTCTCAGGTCTTGCATAGCCCTGCTTTGAATGGTTTGTTGACGGGGGTTTCACAGCAGACTGGAGTCGGCTCACCCGATGTCTTTAGGAACATGTTGCAGCAGTTCACACAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGCCCAACAGGTTGGCAGTCAGGATATGGGGAATGTGTTTGCTGGAATGGAAAGAGGGCAAGGTAGTGGCATCGACTTCTCAAGGATGCTTCAACAGATGATGCCCATTGTGTCTCAAGCTCTTGGAGGTGGAACTCCTTCTCAGTCACTCTCTGCTGAAAGGAGAGATCCCCAGGCACTCTATGGAGATGGAACGCATAGCAGAGATGAAAATATTGATGATCAAAGTTTACAGATCAATCTTCAACCAGTGGTAGAGACAATGGAGCACCTGAGTACACAGTCAGATGTTTTCCGTGGGCTGGTTGAAAATGCTATCCAGCTATCCACAAGGGGAAGTTCTTATGATGGTCTTCTGGATGAGTTGTGCGGTGATGAATGTCTTGCCAGTGACTATATGGAGATGTTACGACATGATGTGAATCAGCGGCTAAACGGGGATTCTGGGCGAGACTAG 2835 0.4635 MAGQSSNDGPSASNVSVELSDSTVQLNIKTLDSQIYTFQVDKNMLVSLLKEKIANEVGVPVGQQRLIFRGKVLNDNHVLSEYHIENGDTLHLVQRQLNQSQAPGTSSGETTGTSGNRDASSGALHNRVGQISHSVVLGTFNVGEQGEGIVPDLSRVIGAVLNSIGIGGQSTGGVANGTQSSSSSNPSAQGPSGNEAGGTHLESQNQSGNQAQTGQTFPNQPFQSLPQAFQIPLAAGSLTVPSLSAPIPHSLDTLSEFINRMEQALSQNGYQTNSSSMSGGEQTRVELPSNPQGLPTVEALSVVLHRAEQLLSGHAIAALSHIAGRLEREGTTSDPNIRGQIQSESMQLGLAMQHLGAFLLELGRTILTLRMGQSSAESAINAGPAVYISPSGPNPIMVQPFPLQTSSLFGSSVPSSSPATFGTVGVGSAPRNVNIHIHAGTPLAPIVSAIGSRANNGEGAPPNERRNAPGSGDLGSMRALPVRNIIAAAVPAYPAGTGTSSGTQSSGVSTSQLPSDSIALSSVIADINSRARNILGNMQGDSTVLSGRVESTNRDLPVRRESRPTPGNEQLDAVEVNAVEASSVSSFACSSESGIRQPQPEAAQTSNNEERDILSNTFGSTSSNQDSLSWSRGEKIGKPENVQENAQSAGEKRATESTKAVPLGLGMSGLERKRRTGPQQPVSGGADDGSASSSGNQNQESRTSGLNILQALASHGTSRNQGNANGPSQVPASSGDGQIDMAGVMSQVLHSPALNGLLTGVSQQTGVGSPDVFRNMLQQFTQSPQMRNTVNQIAQQVGSQDMGNVFAGMERGQGSGIDFSRMLQQMMPIVSQALGGGTPSQSLSAERRDPQALYGDGTHSRDENIDDQSLQINLQPVVETMEHLSTQSDVFRGLVENAIQLSTRGSSYDGLLDELCGDECLASDYMEMLRHDVNQRLNGDSGRD 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00130 944 MobiDBLite consensus disorder prediction 833 854 - -
Pral943g00130 944 Gene3D - 13 108 - -
Pral943g00130 944 SMART ubq_7 24 95 IPR000626 GO:0005515
Pral943g00130 944 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 943 - -
Pral943g00130 944 FunFam Large proline-rich protein BAG6 16 109 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 716 739 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 545 570 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 171 223 - -
Pral943g00130 944 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pral943g00130 944 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pral943g00130 944 PRINTS Ubiquitin signature 55 75 IPR019956 -
Pral943g00130 944 PRINTS Ubiquitin signature 76 97 IPR019956 -
Pral943g00130 944 PRINTS Ubiquitin signature 34 54 IPR019956 -
Pral943g00130 944 MobiDBLite consensus disorder prediction 683 702 - -
Pral943g00130 944 CDD Ubl_ubiquitin_like 26 93 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 590 609 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 270 290 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 716 735 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 453 476 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 614 702 - -
Pral943g00130 944 SUPERFAMILY Ubiquitin-like 18 97 IPR029071 -
Pral943g00130 944 MobiDBLite consensus disorder prediction 98 123 - -
Pral943g00130 944 MobiDBLite consensus disorder prediction 614 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00130 Pral-Chr943 665021 675102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00130 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 41.667 7.36e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00130 - - gmx:100783611 1149.04