Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00129 ATGGCAGGCCAGAGCTCTAACGATGGTCCCAGTGCCAGTAATGTTTCAGTTGAATTGTCTGATTCAACTGTTCAGCTCAATATCAAGACTTTAGATTCCCAAATTTACACTTTTCAAGTGGACAAAAACATGCTAGTTTCATTGTTGAAGGAGAAAATAGCCAATGAAGTGGGTGTTCCAGTGGGTCAGCAGCGGTTAATATTCAGGGGGAAGGTCTTGAATGATAATCATGTTCTTTCTGAGTATCACATTGAGAATGGGGATACACTGCATTTAGTTCAAAGGCAACTGAACCAGTCACAGGCTCCTGGTACCAGTTCTGGTGAGACAACTGGTACAAGTGGAAACCGAGATGCAAGCTCTGGAGCGCTTCATAATCGTGTTGGGCAAATTTCACACAGTGTTGTTCTGGGAACCTTTAATGTGGGGGAGCAAGGTGAAGGAATTGTTCCTGATCTTAGTCGGGTCATTGGGGCGGTCTTGAACTCTATTGGAATTGGTGGGCAGAGCACTGGCGGTGTTGCAAATGGTACACAGTCTTCTTCTTCAGGTCCTTCTGGGAATGAAGCTGGAGGGACGCATCTTGAAAGTCAGAACCAATCAGGAAATCAAGCTCAGACTGGACAGACATTTCCTAACCAACCATTCCAATCTTTACCTCAAGCATTTCAGATTCCTCTGGCTGCGGGATCATTAACTGTGCCATCACTTAGTGCTCCAATTCCTCATTCGCTGGATACTCTTTCTGAGTTTATAAATCGCATGGAGCAGGCACTATCACAAAATGGTTATCAAACAAATTCATCTTCAATGAGTGGAGGAGAGCAAACACGTGTGGAATTACCCTCCAACCCGCAAGGGTTGCCAACAGTTGAAGCATTAAGTGTTGTCCTGCATCGTGCTGAACAGCTGCTCAGTGGTCATGCCATTGCTGCACTATCTCATATTGCAGGACGCTTGGAGAGAGAGGGAACTACTTCTGATCCCAATATAAGGGGTCAAATACAGTCTGAGTCTATGCAACTAGGACTTGCCATGCAGCATTTGGGTGCATTTCTACTTGAGCTTGGCCGTACAATCCTGACGCTGCGTATGGGACAGTCTTCTGCAGAGTCTGCTATCAATGCTGGGCCTGCGGTTTATATTTCTCCATCAGGACCTAATCCTATAATGGTGCAGCCTTTCCCACTTCAAACAAGCTCCCTGTTTGGTAGTTCTGTTCCTTCTTCATCTCCGGCAACATTTGGTACAGTTGGTGTTGGAAGTGCACCTCGGAATGTAAACATCCATATACATGCAGGTACTCCTCTTGCACCGATTGTTTCGGCAATTGGTTCTAGGGCAAATAATGGGGAAGGGGCACCACCAAATGAACGTCGTAATGCTCCTGGCTCTGGTGATTTAGGTTCAATGCGTGCTTTACCCGTGAGAAACATCATTGCAGCAGCTGTACCAGCATACCCTGCTGGTACTGGGACCAGTAGTGGCACGCAATCCAGTGGTGTTTCTACTTCACAACTGCCTTCTGATTCAATTGCATTATCATCTGTTATTGCTGATATCAATTCTCGTGCTAGAAACATTTTAGGAAATATGCAAGGGGATAGTACAGTTCTGTCAGGTCGAGTGGAGTCAACTAATCGGGACTTGCCTGTCAGAAGGGAATCACGACCTACTCCTGGTAATGAACAGCTAGATGCCGTGGAGGTAAACGCTGTTGAAGCTTCCAGTGTGTCTTCATTTGCTTGCTCATCTGAAAGTGGAATACGTCAGCCCCAGCCTGAGGCCGCCCAAACTTCTAACAATGAGGAGAGAGATATTTTGAGCAACACATTTGGTTCAACTTCTTCCAATCAAGATTCATTAAGTTGGTCAAGGGGAGAAAAAATAGGAAAGCCGGAAAATGTACAAGAAAATGCTCAATCTGCTGGTGAAAAACGTGCAACTGAAAGCACCAAAGCTGTTCCTCTTGGACTGGGTATGAGTGGCTTGGAGCGTAAGAGGAGAACGGGACCGCAACAACCTGTAAGTGGAGGTGCTGATGATGGATCAGCCAGTTCTTCAGGTAATCAAAATCAGGAATCCAGGACAAGTGGTCTTAATATTTTGCAAGCTCTTGCAAGTCATGGAACTTCTAGGAACCAGGGAAATGCTAATGGTCCTTCCCAAGTGCCCGCTTCCTCTGGTGATGGCCAGATTGATATGGCAGGTGTTATGTCTCAGGTCTTGCATAGCCCTGCTTTGAATGGTTTGTTGACGGGGGTTTCACAGCAGACTGGAGTCGGCTCACCCGATGTCTTTAGGAACATGTTGCAGCAGTTCACACAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGCCCAACAGGTTGGCAGTCAGGATATGGGGAATGTGTTTGCTGGAATGGAAAGAGGGCAAGGTAGTGGCATCGACTTCTCAAGGATGCTTCAACAGATGATGCCCATTGTGTCTCAAGCTCTTGGAGGTGGAACTCCTTCTCAGTCACTCTCTGCTGAAAGGAGAGATCCCCAGGCACTCTATGGAGATGGAACGCATAGCAGAGATGAAAATATTGATGATCAAAGTTTACAGATCAATCTTCAACCAGTGGTAGAGACAATGGAGCACCTGAGTACACAGTCAGATGTTTTCCGTGGGCTGGTTGAAAATGCTATCCAGCTATCCACAAGGGGAAGTTCTTATGATGGTCTTCTGGATGAGTTGTGCGGTGATGAATGTCTTGCCAGTGACTATATGGAGATGTTACGACATGATGTGAATCAGCGGCTAAACGGGGATTCTGGGCGAGACTAG 2817 0.4636 MAGQSSNDGPSASNVSVELSDSTVQLNIKTLDSQIYTFQVDKNMLVSLLKEKIANEVGVPVGQQRLIFRGKVLNDNHVLSEYHIENGDTLHLVQRQLNQSQAPGTSSGETTGTSGNRDASSGALHNRVGQISHSVVLGTFNVGEQGEGIVPDLSRVIGAVLNSIGIGGQSTGGVANGTQSSSSGPSGNEAGGTHLESQNQSGNQAQTGQTFPNQPFQSLPQAFQIPLAAGSLTVPSLSAPIPHSLDTLSEFINRMEQALSQNGYQTNSSSMSGGEQTRVELPSNPQGLPTVEALSVVLHRAEQLLSGHAIAALSHIAGRLEREGTTSDPNIRGQIQSESMQLGLAMQHLGAFLLELGRTILTLRMGQSSAESAINAGPAVYISPSGPNPIMVQPFPLQTSSLFGSSVPSSSPATFGTVGVGSAPRNVNIHIHAGTPLAPIVSAIGSRANNGEGAPPNERRNAPGSGDLGSMRALPVRNIIAAAVPAYPAGTGTSSGTQSSGVSTSQLPSDSIALSSVIADINSRARNILGNMQGDSTVLSGRVESTNRDLPVRRESRPTPGNEQLDAVEVNAVEASSVSSFACSSESGIRQPQPEAAQTSNNEERDILSNTFGSTSSNQDSLSWSRGEKIGKPENVQENAQSAGEKRATESTKAVPLGLGMSGLERKRRTGPQQPVSGGADDGSASSSGNQNQESRTSGLNILQALASHGTSRNQGNANGPSQVPASSGDGQIDMAGVMSQVLHSPALNGLLTGVSQQTGVGSPDVFRNMLQQFTQSPQMRNTVNQIAQQVGSQDMGNVFAGMERGQGSGIDFSRMLQQMMPIVSQALGGGTPSQSLSAERRDPQALYGDGTHSRDENIDDQSLQINLQPVVETMEHLSTQSDVFRGLVENAIQLSTRGSSYDGLLDELCGDECLASDYMEMLRHDVNQRLNGDSGRD 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00129 938 MobiDBLite consensus disorder prediction 677 696 - -
Pral943g00129 938 SMART ubq_7 24 95 IPR000626 GO:0005515
Pral943g00129 938 MobiDBLite consensus disorder prediction 584 603 - -
Pral943g00129 938 FunFam Large proline-rich protein BAG6 16 109 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 710 729 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 608 696 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 447 470 - -
Pral943g00129 938 PRINTS Ubiquitin signature 34 54 IPR019956 -
Pral943g00129 938 PRINTS Ubiquitin signature 55 75 IPR019956 -
Pral943g00129 938 PRINTS Ubiquitin signature 76 97 IPR019956 -
Pral943g00129 938 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pral943g00129 938 MobiDBLite consensus disorder prediction 608 625 - -
Pral943g00129 938 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pral943g00129 938 Gene3D - 13 108 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 827 848 - -
Pral943g00129 938 CDD Ubl_ubiquitin_like 26 93 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 710 733 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 539 564 - -
Pral943g00129 938 MobiDBLite consensus disorder prediction 168 217 - -
Pral943g00129 938 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 937 - -
Pral943g00129 938 SUPERFAMILY Ubiquitin-like 18 97 IPR029071 -
Pral943g00129 938 MobiDBLite consensus disorder prediction 98 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00129 Pral-Chr943 665021 675102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00129 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 41.667 7.31e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00129 - - gmx:100783611 1157.13