Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00127 ATGGCAGGCCAGAGCTCTAACGATGGTCCCAGTGCCAGTAATGTTTCAGTTGAATTGTCTGATTCAACTGTTCAGCTCAATATCAAGACTTTAGATTCCCAAATTTACACTTTTCAAGTGGACAAAAACATGCTAGTTTCATTGTTGAAGGAGAAAATAGCCAATGAAGTGGGTGTTCCAGTGGGTCAGCAGCGGTTAATATTCAGGGGGAAGGTCTTGAATGATAATCATGTTCTTTCTGAGTATCACATTGAGAATGGGGATACACTGCATTTAGTTCAAAGGCAACTGAACCAGTCACAGGCTCCTGGTACCAGTTCTGGTGAGACAACTGGTACAAGTGGAAACCGAGGTAAAGATGCAAGCTCTGGAGCGCTTCATAATCGTGTTGGGCAAATTTCACACAGTGTTGTTCTGGGAACCTTTAATGTGGGGGAGCAAGGTGAAGGAATTGTTCCTGATCTTAGTCGGGTCATTGGGGCGGTCTTGAACTCTATTGGAATTGGTGGGCAGAGCACTGGCGGTGTTGCAAATGGTACACAGTCTTCTTCTTCATCAAATCCATCTGCTCAGGGTCCTTCTGGGAATGAAGCTGGAGGGACGCATCTTGAAAGTCAGAACCAATCAGGAAATCAAGCTCAGACTGGACAGACATTTCCTAACCAACCATTCCAATCTTTACCTCAAGCATTTCAGATTCCTCTGGCTGCGGGATCATTAACTGTGCCATCACTTAGTGCTCCAATTCCTCATTCGCTGGATACTCTTTCTGAGTTTATAAATCGCATGGAGCAGGCACTATCACAAAATGGTTATCAAACAAATTCATCTTCAATGAGTGGAGGAGAGCAAACACGTGTGGAATTACCCTCCAACCCGCAAGGGTTGCCAACAGTTGAAGCATTAAGTGTTGTCCTGCATCGTGCTGAACAGCTGCTCAGTGGTCATGCCATTGCTGCACTATCTCATATTGCAGGACGCTTGGAGAGAGAGGGAACTACTTCTGATCCCAATATAAGGGGTCAAATACAGTCTGAGTCTATGCAACTAGGACTTGCCATGCAGCATTTGGGTGCATTTCTACTTGAGCTTGGCCGTACAATCCTGACGCTGCGTATGGGACAGTCTTCTGCAGAGTCTGCTATCAATGCTGGGCCTGCGGTTTATATTTCTCCATCAGGACCTAATCCTATAATGGTGCAGCCTTTCCCACTTCAAACAAGCTCCCTGTTTGGTAGTTCTGTTCCTTCTTCATCTCCGGCAACATTTGGTACAGTTGGTGTTGGAAGTGCACCTCGGAATGTAAACATCCATATACATGCAGGTACTCCTCTTGCACCGATTGTTTCGGCAATTGGTTCTAGGGCAAATAATGGGGAAGGGGCACCACCAAATGAACGTCGTAATGCTCCTGGCTCTGGTGATTTAGGTTCAATGCGTGCTTTACCCGTGAGAAACATCATTGCAGCAGCTGTACCAGCATACCCTGCTGGTACTGGGACCAGTAGTGGCACGCAATCCAGTGGTGTTTCTACTTCACAACTGCCTTCTGATTCAATTGCATTATCATCTGTTATTGCTGATATCAATTCTCGTGCTAGAAACATTTTAGGAAATATGCAAGGGGATAGTACAGTTCTGTCAGGTCGAGTGGAGTCAACTAATCGGGACTTGCCTGTCAGAAGGGAATCACGACCTACTCCTGGTAATGAACAGCTAGATGCCGTGGAGGTAAACGCTGTTGAAGCTTCCAGTGTGTCTTCATTTGCTTGCTCATCTGAAAGTGGAATACGTCAGCCCCAGCCTGAGGCCGCCCAAACTTCTAACAATGAGGAGAGAGATATTTTGAGCAACACATTTGGTTCAACTTCTTCCAATCAAGATTCATTAAGTTGGTCAAGGGGAGAAAAAATAGGAAAGCCGGAAAATGTACAAGAAAATGCTCAATCTGCTGGTGAAAAACGTGCAACTGAAAGCACCAAAGCTGTTCCTCTTGGACTGGGTATGAGTGGCTTGGAGCGTAAGAGGAGAACGGGACCGCAACAACCTGTAAGTGGAGGTGCTGATGATGGATCAGCCAGTTCTTCAGGTAATCAAAATCAGGAATCCAGGACAAGTGGTCTTAATATTTTGCAAGCTCTTGCAAGTCATGGAACTTCTAGGAACCAGGGAAATGCTAATGGTCCTTCCCAAGTGCCCGCTTCCTCTGGTGATGGCCAGATTGATATGGCAGGTGTTATGTCTCAGGTCTTGCATAGCCCTGCTTTGAATGGTTTGTTGACGGGGGTTTCACAGCAGACTGGAGTCGGCTCACCCGATGTCTTTAGGAACATGTTGCAGCAGTTCACACAGAGCCCACAGATGAGGAACACTGTCAATCAAATTGCCCAACAGGTTGGCAGTCAGGATATGGGGAATGTGTTTGCTGGAATGGAAAGAGGGCAAGGTAGTGGCATCGACTTCTCAAGGATGCTTCAACAGATGATGCCCATTGTGTCTCAAGCTCTTGGAGGTGGAACTCCTTCTCAGTCACTCTCTGCTGAAAGGAGAGATCCCCAGGCACTCTATGGAGATGGAACGCATAGCAGAGATGAAAATATTGATGATCAAAGTTTACAGATCAATCTTCAACCAGTGGTAGAGACAATGGAGCACCTGAGTACACAGTCAGATGTTTTCCGTGGGCTGGTTGAAAATGCTATCCAGCTATCCACAAGGGGAAGTTCTTATGATGGTCTTCTGGATGAGTTGTGCGGTGATGAATGTCTTGCCAGTGACTATATGGAGATGTTACGACATGATGTGAATCAGCGGCTAAACGGGGATTCTGGGCGAGACTAG 2841 0.4632 MAGQSSNDGPSASNVSVELSDSTVQLNIKTLDSQIYTFQVDKNMLVSLLKEKIANEVGVPVGQQRLIFRGKVLNDNHVLSEYHIENGDTLHLVQRQLNQSQAPGTSSGETTGTSGNRGKDASSGALHNRVGQISHSVVLGTFNVGEQGEGIVPDLSRVIGAVLNSIGIGGQSTGGVANGTQSSSSSNPSAQGPSGNEAGGTHLESQNQSGNQAQTGQTFPNQPFQSLPQAFQIPLAAGSLTVPSLSAPIPHSLDTLSEFINRMEQALSQNGYQTNSSSMSGGEQTRVELPSNPQGLPTVEALSVVLHRAEQLLSGHAIAALSHIAGRLEREGTTSDPNIRGQIQSESMQLGLAMQHLGAFLLELGRTILTLRMGQSSAESAINAGPAVYISPSGPNPIMVQPFPLQTSSLFGSSVPSSSPATFGTVGVGSAPRNVNIHIHAGTPLAPIVSAIGSRANNGEGAPPNERRNAPGSGDLGSMRALPVRNIIAAAVPAYPAGTGTSSGTQSSGVSTSQLPSDSIALSSVIADINSRARNILGNMQGDSTVLSGRVESTNRDLPVRRESRPTPGNEQLDAVEVNAVEASSVSSFACSSESGIRQPQPEAAQTSNNEERDILSNTFGSTSSNQDSLSWSRGEKIGKPENVQENAQSAGEKRATESTKAVPLGLGMSGLERKRRTGPQQPVSGGADDGSASSSGNQNQESRTSGLNILQALASHGTSRNQGNANGPSQVPASSGDGQIDMAGVMSQVLHSPALNGLLTGVSQQTGVGSPDVFRNMLQQFTQSPQMRNTVNQIAQQVGSQDMGNVFAGMERGQGSGIDFSRMLQQMMPIVSQALGGGTPSQSLSAERRDPQALYGDGTHSRDENIDDQSLQINLQPVVETMEHLSTQSDVFRGLVENAIQLSTRGSSYDGLLDELCGDECLASDYMEMLRHDVNQRLNGDSGRD 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00127 946 MobiDBLite consensus disorder prediction 685 704 - -
Pral943g00127 946 Gene3D - 13 108 - -
Pral943g00127 946 SMART ubq_7 24 95 IPR000626 GO:0005515
Pral943g00127 946 MobiDBLite consensus disorder prediction 592 611 - -
Pral943g00127 946 FunFam Large proline-rich protein BAG6 16 109 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 272 292 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 455 478 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 616 704 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 718 737 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 98 124 - -
Pral943g00127 946 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pral943g00127 946 PRINTS Ubiquitin signature 76 97 IPR019956 -
Pral943g00127 946 PRINTS Ubiquitin signature 55 75 IPR019956 -
Pral943g00127 946 PRINTS Ubiquitin signature 34 54 IPR019956 -
Pral943g00127 946 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pral943g00127 946 MobiDBLite consensus disorder prediction 616 633 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 835 856 - -
Pral943g00127 946 CDD Ubl_ubiquitin_like 26 93 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 718 741 - -
Pral943g00127 946 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 945 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 547 572 - -
Pral943g00127 946 MobiDBLite consensus disorder prediction 173 225 - -
Pral943g00127 946 SUPERFAMILY Ubiquitin-like 18 97 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00127 Pral-Chr943 665021 675267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00127 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 41.667 7.53e-12 62.0