Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00117 ATGGCAGACCAATGCATGAGATCACTATATCAACAAATGACAAGCCAAAACTTCTCAGTCAGCAATTATGCCTTGCAGTTGACTTCCCTGCTGTCTGAAACTGGGCTGAATATCCAAGAAGCACATGCCTTTTCAACATCGGACGGTTATTCATTGGATGTTTTTGTTGTTGATGGTTGGCCTGTTGAGGATACTGAGAAGCTTAAACATATGCTGACAAAAAAAATTCAGAAACTTGAGCAGCCTTCCTTCAAGAAAATTGGCAGTCAAACTGCACAGCAAGAACAAATGAGGATCAATTTTATCTCTAATGATGTGAATCTACCTTTTTGTGGAAGTGTTGCCTGGGAAATTGATGCAAGCTGTTTGAAATATGAAAGCAAAATTGCATCTGGACCTTTCTTTGATATGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTCAAGACTGAGAATCTGAATGAAAATATACAAAGGGAGTTTTCTCAAGAGATCAATATTCTGAGTAAATTGTGTCACAAGAATGTTGTCAAATTTGTGGGGGCTAGTACAAAACTTCCAGACCTATTCATTGTCACGGAATACATGTTCGGTGGAAGTCTGTATGAGTTTCTGCATACACAGAAGGCTGTGCTTACTCTTCCATCTTTGCTCAGAGTAGCAACCGATGTTTGTGAAGGAATGAAATATTTGCATCAGAATGACATCATACACAGGGACCTCAAAACTGCGAATCTTTTGATGGATGAGAATAGGGTAGTGAAGGTTGCTGATTTTGGTGTGGCAAGGGTGGAAGATCAGTCAGGCATTATGACTGCGGAAACTGGAACTTATAGATGGATGGCTCCGGAGGTTATTGAGCACAAACCCTATAATCACAAAGCCGATGTGTTCAGCTTCGGAATTACGCTGTGGGAACTGCTCACAGGAAAGCTTCCACATGAGCATCTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCACAAGGGGTTGAGACCCAACATTCCGAGGCACACGCATCCAGTGTTGATAGAGTTGATGAGCCGTTGCTGGCACCAAGACCCTTCCTTGAGACCCGAATTCTCAGAAATTCTGGAATTTCTGCACCATTTTTCCCATAATGTTGGAGGCGAAGTTGCCACTGACGCCATAAGAGACAACGTATAA 1179 0.4215 MADQCMRSLYQQMTSQNFSVSNYALQLTSLLSETGLNIQEAHAFSTSDGYSLDVFVVDGWPVEDTEKLKHMLTKKIQKLEQPSFKKIGSQTAQQEQMRINFISNDVNLPFCGSVAWEIDASCLKYESKIASGPFFDMYKGVFCNQEVAIKVLKTENLNENIQREFSQEINILSKLCHKNVVKFVGASTKLPDLFIVTEYMFGGSLYEFLHTQKAVLTLPSLLRVATDVCEGMKYLHQNDIIHRDLKTANLLMDENRVVKVADFGVARVEDQSGIMTAETGTYRWMAPEVIEHKPYNHKADVFSFGITLWELLTGKLPHEHLSPLQAAVGVVHKGLRPNIPRHTHPVLIELMSRCWHQDPSLRPEFSEILEFLHHFSHNVGGEVATDAIRDNV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00117 392 Gene3D Phosphorylase Kinase; domain 1 112 200 - -
Pral943g00117 392 ProSiteProfiles Protein kinase domain profile. 123 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00117 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Pral943g00117 392 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 375 - -
Pral943g00117 392 PRINTS Tyrosine kinase catalytic domain signature 299 321 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 PRINTS Tyrosine kinase catalytic domain signature 280 290 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 PRINTS Tyrosine kinase catalytic domain signature 197 210 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 PRINTS Tyrosine kinase catalytic domain signature 234 252 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 PRINTS Tyrosine kinase catalytic domain signature 343 365 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 Gene3D Transferase(Phosphotransferase) domain 1 202 387 - -
Pral943g00117 392 SMART serkin_6 123 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00117 392 FunFam Kinase suppressor of Ras 1 113 200 - -
Pral943g00117 392 CDD STKc_MAP3K-like 129 372 - -
Pral943g00117 392 Pfam Protein tyrosine and serine/threonine kinase 124 372 IPR001245 GO:0004672|GO:0006468
Pral943g00117 392 SUPERFAMILY ACT-like 26 80 IPR045865 -
Pral943g00117 392 SUPERFAMILY Protein kinase-like (PK-like) 105 372 IPR011009 -
Pral943g00117 392 ProSiteProfiles ACT domain profile. 12 92 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00117 Pral-Chr943 594131 598022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00117 26 382 MAP Kinase Kinase Kinase AT4G35780 60.615 1.51e-159 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral943g00117 PK_Tyr_Ser-Thr 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00117 - - gmx:100818047 524.628