Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00116 ATGAGATCACTATATCAACAAATGACAAGCCAAAACTTCTCAGTCAGCAATTATGCCTTGCAGTTGACTTCCCTGCTGTCTGAAACTGGGCTGAATATCCAAGAAGCACATGCCTTTTCAACATCGGACGGTTATTCATTGGATGTTTTTGTTGTTGATGGTTGGCCTGTTGAGGATACTGAGAAGCTTAAACATATGCTGACAAAAAAAATTCAGAAACTTGAGCAGCCTTCCTTCAAGAAAATTGGCAGTCAAACTGCACAGCAAGAACAAATGAGGATCAATTTTATCTCTAATGATGTGAATCTACCTTTTTGTGGAAGTGTTGCCTGGGAAATTGATGCAAGCTGTTTGAAATATGAAAGCAAAATTGCATCTGGACCTTTCTTTGATATGTATAAAGGTGTTTTCTGTAACCAAGAAGTAGCTATCAAAGTTCTCAAGACTGAGAATCTGAATGAAAATATACAAAGGGAGTTTTCTCAAGAGATCAATATTCTGAGTAAATTGTGTCACAAGAATGTTGTCAAATTTGTGGGGGCTAGTACAAAACTTCCAGACCTATTCATTGTCACGGAATACATGTTCGGTGGAAGTCTGTATGAGTTTCTGCATACACAGAAGGCTGTGCTTACTCTTCCATCTTTGCTCAGAGTAGCAACCGATGTTTGTGAAGGAATGAAATATTTGCATCAGAATGACATCATACACAGGGACCTCAAAACTGCGAATCTTTTGATGGATGAGAATAGGGTAGTGAAGGTTGCTGATTTTGGTGTGGCAAGGGTGGAAGATCAGTCAGGCATTATGACTGCGGAAACTGGAACTTATAGATGGATGGCTCCGGAGGTTATTGAGCACAAACCCTATAATCACAAAGCCGATGTGTTCAGCTTCGGAATTACGCTGTGGGAACTGCTCACAGGAAAGCTTCCACATGAGCATCTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCACAAGGGGTTGAGACCCAACATTCCGAGGCACACGCATCCAGTGTTGATAGAGTTGATGAGCCGTTGCTGGCACCAAGACCCTTCCTTGAGACCCGAATTCTCAGAAATTCTGGAATTTCTGCACCATTTTTCCCATAATGTTGGAGGCGAAGTTGCCACTGACGCCATAAGAGACAACGTATAA 1164 0.4201 MRSLYQQMTSQNFSVSNYALQLTSLLSETGLNIQEAHAFSTSDGYSLDVFVVDGWPVEDTEKLKHMLTKKIQKLEQPSFKKIGSQTAQQEQMRINFISNDVNLPFCGSVAWEIDASCLKYESKIASGPFFDMYKGVFCNQEVAIKVLKTENLNENIQREFSQEINILSKLCHKNVVKFVGASTKLPDLFIVTEYMFGGSLYEFLHTQKAVLTLPSLLRVATDVCEGMKYLHQNDIIHRDLKTANLLMDENRVVKVADFGVARVEDQSGIMTAETGTYRWMAPEVIEHKPYNHKADVFSFGITLWELLTGKLPHEHLSPLQAAVGVVHKGLRPNIPRHTHPVLIELMSRCWHQDPSLRPEFSEILEFLHHFSHNVGGEVATDAIRDNV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00116 387 ProSiteProfiles ACT domain profile. 7 87 IPR002912 -
Pral943g00116 387 SUPERFAMILY Protein kinase-like (PK-like) 100 367 IPR011009 -
Pral943g00116 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Pral943g00116 387 CDD STKc_MAP3K-like 124 367 - -
Pral943g00116 387 PRINTS Tyrosine kinase catalytic domain signature 192 205 IPR001245 GO:0004672|GO:0006468
Pral943g00116 387 PRINTS Tyrosine kinase catalytic domain signature 275 285 IPR001245 GO:0004672|GO:0006468
Pral943g00116 387 PRINTS Tyrosine kinase catalytic domain signature 229 247 IPR001245 GO:0004672|GO:0006468
Pral943g00116 387 PRINTS Tyrosine kinase catalytic domain signature 338 360 IPR001245 GO:0004672|GO:0006468
Pral943g00116 387 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672|GO:0006468
Pral943g00116 387 FunFam Kinase suppressor of Ras 1 108 195 - -
Pral943g00116 387 SMART serkin_6 118 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00116 387 Gene3D Transferase(Phosphotransferase) domain 1 197 382 - -
Pral943g00116 387 Gene3D Phosphorylase Kinase; domain 1 107 195 - -
Pral943g00116 387 ProSiteProfiles Protein kinase domain profile. 118 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00116 387 SUPERFAMILY ACT-like 21 75 IPR045865 -
Pral943g00116 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 370 - -
Pral943g00116 387 Pfam Protein tyrosine and serine/threonine kinase 119 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00116 Pral-Chr943 594131 598260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00116 21 377 MAP Kinase Kinase Kinase AT4G35780 60.615 8.81e-160 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral943g00116 PK_Tyr_Ser-Thr 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00116 - - gmx:100818047 524.628