Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00110 ATGGGACTTGGTTTCTTCAAGGCGCTTTGTTGTAACAACTCTCAGCATGAAATTCCCATTGACTCCTCGGACTTCTCTCCCGGCCGCCCTCGCAAGCAGACGTACGAGGATCATCTGCACGACGTCAAACCAGCACCTACTTCGCAAGCGCAGGTCGGGCCGGTGCTGGGAAGGCCCTACGTAGACGTAAGGATGATGTACGAGCTGGAGAAGGAACTGGGGAGAGGGCAGTGCGGGGTGACTTATCTGTGCGCAGAGAAGAGGACGGGGAGAAAGTATGCGTGCAAAAGCATAGCGAGGGGGAAGCTGACGAGGAAGGAGGAGATAGAGGACGTGCGGAGAGAGATACTGATACTGCAGCATCTGTCGGGGCAGCCAAACATAGTGGAATTCAGGGGCGCATACGAGGACAGGCAGAACGTGTACTTGGTCATGGAACTGTGCACCGGCGGGGAGCTGTTTGATCGCATCATCGCCAAAGGGAATTATTCCGAGAAGGAAGCGGCGGCGCTGATCCGGCAGATCGTGACGGTGGTTCACGTGTGCCATTTCATGGGAGTGATGCATCGGGACGTGAAGCCCGAGAATTTCTTGATGACCAGCCAGGACGATGACGCCCCCATGAAGGCCACCGATTTTGGACTCTCCGTCTTCATCGAGCCCGGTAAAGAGTATAAGGAAGTCGTGGGAAGTGCGTACTATGTGGCCCCGGAGGTTCTAAGACGGAATTATGGAAAAGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTTAGTGGGGTGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCTATTCTGGAAGGCAAACCGGATCTTGAAAGCCAACCATGGCCTTCTATTTCAGCTTCTGCCAAGGATTTGATCAGAAAAATGTTGGCATATGATCCCAAGAAACGCATCACAGCCGCTGATGCCCTTGAACATCCATGGATGAAAGTGGGTGGTCAAGCATCTGATAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTAAAGGTAATAGCACAAAACCTATCAGAGGAAGAAATCAAGGGCTTGAAACAAATGTTCCGCAATATGGATACAGATAACAGTGGCACGATCACACTTGAAGAACTCAGAGCTGGATTGTCCAAATTGGGATCCAAACTTAACGAATCTGAAATACGGCAGTTGATGGATGCTGCTGATGTTGACAAGAATGGAACTATTGATTATTATGAATTCATAACTGCCACCATGCATCGGCACAGACTTGAGAAGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGATATATCACGAGAGAGGAGCTTAGGCAGGCATTGACTGAATACGGAATGGGGGATGAAGCCACGATAGATGAAGTGATCGACGATGTGGACACTGATAAAGATGGCAGGATCAATTACGAGGAGTTTGTGGCTATGATGAAGAACGCGGGATGA 1527 0.4912 MGLGFFKALCCNNSQHEIPIDSSDFSPGRPRKQTYEDHLHDVKPAPTSQAQVGPVLGRPYVDVRMMYELEKELGRGQCGVTYLCAEKRTGRKYACKSIARGKLTRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALIRQIVTVVHVCHFMGVMHRDVKPENFLMTSQDDDAPMKATDFGLSVFIEPGKEYKEVVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAENEKGIFDAILEGKPDLESQPWPSISASAKDLIRKMLAYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFRNMDTDNSGTITLEELRAGLSKLGSKLNESEIRQLMDAADVDKNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGYITREELRQALTEYGMGDEATIDEVIDDVDTDKDGRINYEEFVAMMKNAG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00110 508 Gene3D Phosphorylase Kinase; domain 1 69 152 - -
Pral943g00110 508 Pfam Protein kinase domain 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00110 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pral943g00110 508 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00110 508 Pfam EF-hand domain pair 442 505 IPR002048 GO:0005509
Pral943g00110 508 Pfam EF-hand domain pair 373 433 IPR002048 GO:0005509
Pral943g00110 508 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Pral943g00110 508 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Pral943g00110 508 Gene3D Transferase(Phosphotransferase) domain 1 153 331 - -
Pral943g00110 508 SUPERFAMILY EF-hand 364 504 IPR011992 -
Pral943g00110 508 FunFam calcium-dependent protein kinase 1 153 332 - -
Pral943g00110 508 SUPERFAMILY Protein kinase-like (PK-like) 67 326 IPR011009 -
Pral943g00110 508 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00110 508 FunFam Calcium-dependent protein kinase 1 69 152 - -
Pral943g00110 508 Coils Coil 390 410 - -
Pral943g00110 508 CDD STKc_CAMK 67 324 - -
Pral943g00110 508 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Pral943g00110 508 Gene3D - 332 507 - -
Pral943g00110 508 ProSiteProfiles EF-hand calcium-binding domain profile. 476 508 IPR002048 GO:0005509
Pral943g00110 508 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Pral943g00110 508 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Pral943g00110 508 FunFam Calcium-dependent protein kinase 1 333 508 - -
Pral943g00110 508 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Pral943g00110 508 SMART efh_1 372 400 IPR002048 GO:0005509
Pral943g00110 508 SMART efh_1 479 507 IPR002048 GO:0005509
Pral943g00110 508 SMART efh_1 408 436 IPR002048 GO:0005509
Pral943g00110 508 SMART efh_1 444 472 IPR002048 GO:0005509
Pral943g00110 508 PANTHER SERINE/THREONINE-PROTEIN KINASE 67 500 - -
Pral943g00110 508 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00110 Pral-Chr943 569254 574626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00110 45 507 EF-hand Containing Proteins AT3G20410 72.138 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral943g00110 Pkinase 1.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00110 K13412 - qsa:O6P43_018724 779.245