Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00109 ATGGGACTTGGTTTCTTCAAGGCGCTTTGTTGTAACAACTCTCAGCATGAAATTCCCATTGACTCCTCGGACTTCTCTCCCGGCCGCCCTCGCAAGCAGACGTACGAGGATCATCTGCACGACGTCAAACCAGCACCTACTTCGCAAGCGCAGGTCGGGCCGGTGCTGGGAAGGCCCTACGTAGACGTAAGGATGATGTACGAGCTGGAGAAGGAACTGGGGAGAGGGCAGTGCGGGGTGACTTATCTGTGCGCAGAGAAGAGGACGGGGAGAAAGTATGCGTGCAAAAGCATAGCGAGGGGGAAGCTGACGAGGAAGGAGGAGATAGAGGACGTGCGGAGAGAGATACTGATACTGCAGCATCTGTCGGGGCAGCCAAACATAGTGGAATTCAGGGGCGCATACGAGGACAGGCAGAACGTGTACTTGGTCATGGAACTGTGCACCGGCGGGGAGCTGTTTGATCGCATCATCGCCAAAGGGAATTATTCCGAGAAGGAAGCGGCGGCGCTGATCCGGCAGATCGTGACGGTGGTTCACGTGTGCCATTTCATGGGAGTGATGCATCGGGACGTGAAGCCCGAGAATTTCTTGATGACCAGCCAGGACGATGACGCCCCCATGAAGGCCACCGATTTTGGACTCTCCGTCTTCATCGAGCCCGGTTTGTGCTCCCCCTTCTTCTCATTTTTCACTTCAGTAGCATGGATGAGCCCAGGCCCAAATTACGTCAAATTGAGTTTGAGTACATACTTAGTGCCTGTTTGGACCCATCGTCACTACCAACAGCTGCCAAAGAGAAACCAACATGCTCCTCATCCCGCCCCGCCCTCCGCCTCCCCCTCCCCCTCCCCCTCTTCCTCCCACCCTCAACTCAGTCCCGTTCTGGGCAAACCGTATTTTGACATCAAAACACACTACACTCTGGACAAAGAGTTAGGAAGGGGCCAATTCGGCACCACTTATCTCTGCACCGAAAAGCTCACCGGACTCAAGTACGCTTGTAAGTCCATATCAAGGAGAAAGATGAGCAGCCGGAGGGGAATCGACGATGTGAAGAAGGAAATTATGATCCTGCAGCACCTGACGGGGCAGCCCAACATAGTGGAATTCAAGGGAGCTTACGAGGACTGGCATCACGTGCATTTGGTTATGGAGTTGTGTTCCGGCGGGGAGCTTTTTGATCGCATTATTGCTAGAGGGGTTTACTACGAGGACGAAGGTGCCGTCATATTCAGGCAAGTCGTCAACGTGGTTCACGTTTGTCATTTCATGGGGGTGATGCATCGGGACCTTAAGCCTGAAAATTTCTTGTTGGCCACAAGGCAACCCAATTCTCCCTTGAAAGCCATGGATTTTGGCGCCTCTGTCTTCATTGAGCCAGGTAAAGAGTATAAGGAAGTCGTGGGAAGTGCGTACTATGTGGCCCCGGAGGTTCTAAGACGGAATTATGGAAAAGAGATAGATGTGTGGAGTGCAGGAGTCATTTTATACATCCTCCTTAGTGGGGTGCCTCCATTTTGGGCTGAGAACGAGAAAGGCATATTTGATGCTATTCTGGAAGGCAAACCGGATCTTGAAAGCCAACCATGGCCTTCTATTTCAGCTTCTGCCAAGGATTTGATCAGAAAAATGTTGGCATATGATCCCAAGAAACGCATCACAGCCGCTGATGCCCTTGAACATCCATGGATGAAAGTGGGTGGTCAAGCATCTGATAAGCCTATAGACAGTGCCGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAAATGAAGAAACTTGCCCTAAAGGTAATAGCACAAAACCTATCAGAGGAAGAAATCAAGGGCTTGAAACAAATGTTCCGCAATATGGATACAGATAACAGTGGCACGATCACACTTGAAGAACTCAGAGCTGGATTGTCCAAATTGGGATCCAAACTTAACGAATCTGAAATACGGCAGTTGATGGATGCTGCTGATGTTGACAAGAATGGAACTATTGATTATTATGAATTCATAACTGCCACCATGCATCGGCACAGACTTGAGAAGGAAGAGAACTTGTTCAAGGCTTTCCAATACTTCGACAAGGATAACAGTGGATATATCACGAGAGAGGAGCTTAGGCAGGCATTGACTGAATACGGAATGGGGGATGAAGCCACGATAGATGAAGTGATCGACGATGTGGACACTGATAAAGATGGCAGGATCAATTACGAGGAGTTTGTGGCTATGATGAAGAACGCGGGATGA 2247 0.4971 MGLGFFKALCCNNSQHEIPIDSSDFSPGRPRKQTYEDHLHDVKPAPTSQAQVGPVLGRPYVDVRMMYELEKELGRGQCGVTYLCAEKRTGRKYACKSIARGKLTRKEEIEDVRREILILQHLSGQPNIVEFRGAYEDRQNVYLVMELCTGGELFDRIIAKGNYSEKEAAALIRQIVTVVHVCHFMGVMHRDVKPENFLMTSQDDDAPMKATDFGLSVFIEPGLCSPFFSFFTSVAWMSPGPNYVKLSLSTYLVPVWTHRHYQQLPKRNQHAPHPAPPSASPSPSPSSSHPQLSPVLGKPYFDIKTHYTLDKELGRGQFGTTYLCTEKLTGLKYACKSISRRKMSSRRGIDDVKKEIMILQHLTGQPNIVEFKGAYEDWHHVHLVMELCSGGELFDRIIARGVYYEDEGAVIFRQVVNVVHVCHFMGVMHRDLKPENFLLATRQPNSPLKAMDFGASVFIEPGKEYKEVVGSAYYVAPEVLRRNYGKEIDVWSAGVILYILLSGVPPFWAENEKGIFDAILEGKPDLESQPWPSISASAKDLIRKMLAYDPKKRITAADALEHPWMKVGGQASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFRNMDTDNSGTITLEELRAGLSKLGSKLNESEIRQLMDAADVDKNGTIDYYEFITATMHRHRLEKEENLFKAFQYFDKDNSGYITREELRQALTEYGMGDEATIDEVIDDVDTDKDGRINYEEFVAMMKNAG 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00109 748 SUPERFAMILY Protein kinase-like (PK-like) 67 239 IPR011009 -
Pral943g00109 748 ProSitePatterns EF-hand calcium-binding domain. 621 633 IPR018247 -
Pral943g00109 748 Gene3D Transferase(Phosphotransferase) domain 1 153 243 - -
Pral943g00109 748 SMART serkin_6 307 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 SMART serkin_6 67 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 FunFam Calcium-dependent protein kinase 1 69 152 - -
Pral943g00109 748 SMART efh_1 684 712 IPR002048 GO:0005509
Pral943g00109 748 SMART efh_1 648 676 IPR002048 GO:0005509
Pral943g00109 748 SMART efh_1 612 640 IPR002048 GO:0005509
Pral943g00109 748 SMART efh_1 719 747 IPR002048 GO:0005509
Pral943g00109 748 FunFam Calcium-dependent protein kinase 1 309 392 - -
Pral943g00109 748 Gene3D Transferase(Phosphotransferase) domain 1 393 571 - -
Pral943g00109 748 ProSiteProfiles EF-hand calcium-binding domain profile. 608 643 IPR002048 GO:0005509
Pral943g00109 748 MobiDBLite consensus disorder prediction 265 291 - -
Pral943g00109 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pral943g00109 748 SUPERFAMILY EF-hand 604 744 IPR011992 -
Pral943g00109 748 SUPERFAMILY Protein kinase-like (PK-like) 305 566 IPR011009 -
Pral943g00109 748 ProSitePatterns Protein kinases ATP-binding region signature. 313 336 IPR017441 GO:0005524
Pral943g00109 748 ProSitePatterns EF-hand calcium-binding domain. 657 669 IPR018247 -
Pral943g00109 748 FunFam Calcium-dependent protein kinase 1 573 748 - -
Pral943g00109 748 ProSiteProfiles EF-hand calcium-binding domain profile. 680 715 IPR002048 GO:0005509
Pral943g00109 748 ProSiteProfiles Protein kinase domain profile. 67 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 Coils Coil 630 650 - -
Pral943g00109 748 ProSitePatterns EF-hand calcium-binding domain. 693 705 IPR018247 -
Pral943g00109 748 Pfam Protein kinase domain 67 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 Pfam Protein kinase domain 307 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 CDD STKc_CAMK 306 564 - -
Pral943g00109 748 ProSiteProfiles EF-hand calcium-binding domain profile. 716 748 IPR002048 GO:0005509
Pral943g00109 748 FunFam Calcium-dependent protein kinase 5 393 573 - -
Pral943g00109 748 ProSiteProfiles Protein kinase domain profile. 307 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral943g00109 748 MobiDBLite consensus disorder prediction 270 288 - -
Pral943g00109 748 Pfam EF-hand domain pair 682 745 IPR002048 GO:0005509
Pral943g00109 748 Pfam EF-hand domain pair 613 673 IPR002048 GO:0005509
Pral943g00109 748 ProSitePatterns EF-hand calcium-binding domain. 728 740 IPR018247 -
Pral943g00109 748 Gene3D - 572 747 - -
Pral943g00109 748 PANTHER SERINE/THREONINE-PROTEIN KINASE 302 740 - -
Pral943g00109 748 ProSiteProfiles EF-hand calcium-binding domain profile. 644 679 IPR002048 GO:0005509
Pral943g00109 748 Gene3D Phosphorylase Kinase; domain 1 309 392 - -
Pral943g00109 748 Gene3D Phosphorylase Kinase; domain 1 69 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00109 Pral-Chr943 569254 574626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00109 284 747 EF-hand Containing Proteins AT3G20410 71.336 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral943g00109 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00109 K13412 - qsa:O6P43_018724 743.421