Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00106 ATGCTCAGCTCTCCTCTCCTTGCTCTCTTCCTGCCCTGCTTCGGCATGGCCGCTCTTTTCCTCGTCTACTTCTGCCTTCTCCGGTGCGCCATTTCCGGCCACCCCGATCGCCCGCTTCCCCTCAATTCCCTTTCCCCGGACGGCCTCTCTGCTTCCGAGCTTCATCAATTGCCCACAATCACCGGCCAAGACCTGCTCACTCCCACTGAGTGCGCCGTCTGCCTCGGCGACATCGACGAGGACCACCCCGTTCGCCTCATTCCCGCCTGCAATCACGCTTTCCATTTGGAATGCGCCGATACCTGGCTCTCCCACCATCGTCTCTGCCCTCTTTGTAAAGCCAACCTTCATCCTCAACTCTTCACTCCTTCACAAAACTCCTGTTGA 387 0.584 MLSSPLLALFLPCFGMAALFLVYFCLLRCAISGHPDRPLPLNSLSPDGLSASELHQLPTITGQDLLTPTECAVCLGDIDEDHPVRLIPACNHAFHLECADTWLSHHRLCPLCKANLHPQLFTPSQNSC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00106 128 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 5 118 - -
Pral943g00106 128 SMART ring_2 71 112 IPR001841 -
Pral943g00106 128 Pfam Ring finger domain 70 113 IPR001841 -
Pral943g00106 128 SUPERFAMILY RING/U-box 70 121 - -
Pral943g00106 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 119 IPR013083 -
Pral943g00106 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00106 Pral-Chr943 543661 544047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00106 1 126 C3H Transcription Factor Family AT5G42200 43.939 4.36e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00106 K19037 - gmx:100817919 170.244