Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00099 ATGGCCGAGACCACGCCCAATCACACACAGACCGTTTCTGGATGGGCTGCTCACGATTCTTCTGGCGAAATCACCCCTTACACTTTCAAACGACGCGAGAACGGGCCTAACGACGTTACTATACAGATCTTGTATTGTGGGATCTGCCACACTGACCTCCACTATGTTAGCAATGACTGGGGCATCACCATGTATCCCGTAGTTCCCGGGCACGAGATCGTGGGGTTGATAACGAAGGTGGGAAGCAACGTGAAGGGGTTCAAGGAAGGAGACAGAGCAGGGGTTGGGTGCTTGGCAGCCACCTGCTTGGACTGCGAATACTGCAACAGTGATCAGGAGAACTACTGCCAACAACTACAGTTCACATACAACGGCATCTTCTGGGACGGCAGCATCACCTACGGTGGCTACTCCAACATGATAGTGGCGGACTACAGATATGTAGTGCGCATACCGGAGAACCTGAGGATGGAAGGAGCGGCGCCGCTGCTGTGTGCGGGGATAACGGTGTTCAGTCCGATGAAAGATCACGGACTGGTGGAGTGCGGGGGGAAGAGGATAGGCGTGGTGGGCCTGGGAGGGCTGGGGCACATGGCGGTGAAATTTGGGAAGGCGTTCGGGCACCACGTGACGGTGGTCAGCAGGACGGCGGGCAAGGAGCGGGAGGCGAAGCAGAGACTAGGAGCTGATGAGTTTATAGTGAGCAGCGACCAAAAGCAGATGGAGGGAGGGAAGAGGACGTTGGATTTCATACTGGATACGGTGTCGGGGCAGCATTCTCTGCTGCCTCTCCTGGAACTGCTCAAGGTCAATGGCACCCTGTTCATCGTGGGTGCTCCCAACGAGCCCCTTCAGCTGCCCGCTTTTCCTTTGATCTTCGGGAAAAGGGCGGTGAAAGGAGGCATCATCGGAAGCATGAAGGAGACGCAGGAAATGCTGGAGCTTTGTGGGAAGCACAACATCACGTGCGACACAGAGTTGATAAGGCCCGATCAAATCAACCACGCCATGCACCGCCTCGCCCACGACCATGTCCCTCACCGTTTTGTCATTGACATTGCTTCTGCCTCTCCTGCTCCTTAA 1083 0.5568 MAETTPNHTQTVSGWAAHDSSGEITPYTFKRRENGPNDVTIQILYCGICHTDLHYVSNDWGITMYPVVPGHEIVGLITKVGSNVKGFKEGDRAGVGCLAATCLDCEYCNSDQENYCQQLQFTYNGIFWDGSITYGGYSNMIVADYRYVVRIPENLRMEGAAPLLCAGITVFSPMKDHGLVECGGKRIGVVGLGGLGHMAVKFGKAFGHHVTVVSRTAGKEREAKQRLGADEFIVSSDQKQMEGGKRTLDFILDTVSGQHSLLPLLELLKVNGTLFIVGAPNEPLQLPAFPLIFGKRAVKGGIIGSMKETQEMLELCGKHNITCDTELIRPDQINHAMHRLAHDHVPHRFVIDIASASPAP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00099 360 CDD CAD1 14 352 IPR047109 GO:0016616
Pral943g00099 360 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491
Pral943g00099 360 SUPERFAMILY GroES-like 18 183 IPR011032 -
Pral943g00099 360 Gene3D - 15 353 - -
Pral943g00099 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Pral943g00099 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Pral943g00099 360 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Pral943g00099 360 Pfam Alcohol dehydrogenase GroES-like domain 36 150 IPR013154 -
Pral943g00099 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Pral943g00099 360 Gene3D - 166 323 - -
Pral943g00099 360 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0016616
Pral943g00099 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00099 Pral-Chr943 529017 530730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00099 14 356 Monolignol Biosynthesis Gene Families AT2G21730 58.430 1.38e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00099 K00083 - gmx:100820588 585.104