Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00069 ATGGCTCTCCTTACTTCCTTGCCCGAACAGTCAGATTCAGGTCCCGACTCACAAGTCCCAAAGCGCAAGCGAAATAAGCCGCAGAAGAAGCAGAAACCACCGTCTTCATGGGACCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCGAGAGTTCACGACCCCTCCAAAAACCCCACCCCAGTGGGCTACTCCAAACTAGGATCTTCTTGCAGCTCCATCTGTAGTTTCAAAGACGTTGTTCACGGCAACACACGCGTTGTTCACAGGCCTGATAACTCCTCGCCGGAGAGCAGTGCTCTGGGTCAGCAAGCCGGGTTACTGAGCCGGAAGCCTCCGAATAACTCGTCATCTCGGTCGGCCAAATCCAACGGCGCTCCAAACGGCACTACATGTTCTAGAGGGATGCAATTCAGGAAACTCTCCGGCTGTTATGAATGTCGCATGATTGTTGACCCTTCCAGGCTCCCGATGCCGAGAAGCACTCTATGTTCTTGCCCTCACTGTGGAGAGTTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCTACTCGCCATGCCGTTTCAGAGCTGGGGCCGGAGGATTCGGGTCGAAATATTGTGGAGATAATATTCAAGTCAAGCTGGCTGAAGAAGGGCAGCCCCATCTGTAAGATCGAGCGGATACTCAAAGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGTGCTCAGTACAGCGTCAAGAAGAACCCCAGGTGCGCCGCCGACGGCAACGAGCTACTGCGATTCCACTGCATCAGCCTCTCATGCTCCTTGGGTGCACGTGGCTCCTCCTCCTTGTGCGGCTCGCTCCCCGGCTGCGGTGTGTGCACCATCATCCGCCACGGCTTCCAGGGCAAGTCTGATAGTGCCGGTGCGGCTGAGCAGCCACACTGCAAAGGAGTGCGGACCACGGCCAGCAGCGGTAGGGCCCACGACGCCTTGCAGTGTAACGATACTAGGAGGGCGATGCTGGTGTGCCGTGTCATTGCCGGGAGGGTGAAGCGCGTGGCGGAGGAGACTCCGGCGGAGGAGGAGACCGTATCGGCTGGGTCTTATGACTCGGTAGCCGGGAGCGCCGGGGTCTACTCGAATCTCGAGGAGTTGGTGGTGTTCAATCCGAAAGCTATCCTTCCTTGTTTCGTCGTGATTTACAAAGTGATGCCATGTTGA 1230 0.5634 MALLTSLPEQSDSGPDSQVPKRKRNKPQKKQKPPSSWDQIKNLLTCKQIQGSRVHDPSKNPTPVGYSKLGSSCSSICSFKDVVHGNTRVVHRPDNSSPESSALGQQAGLLSRKPPNNSSSRSAKSNGAPNGTTCSRGMQFRKLSGCYECRMIVDPSRLPMPRSTLCSCPHCGEFFPKMESLELHQATRHAVSELGPEDSGRNIVEIIFKSSWLKKGSPICKIERILKVHNTQRTIQRFEECRDAVKSRAQYSVKKNPRCAADGNELLRFHCISLSCSLGARGSSSLCGSLPGCGVCTIIRHGFQGKSDSAGAAEQPHCKGVRTTASSGRAHDALQCNDTRRAMLVCRVIAGRVKRVAEETPAEEETVSAGSYDSVAGSAGVYSNLEELVVFNPKAILPCFVVIYKVMPC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00069 409 SUPERFAMILY ADP-ribosylation 191 405 - -
Pral943g00069 409 ProSitePatterns Zinc finger C2H2 type domain signature. 166 189 IPR013087 -
Pral943g00069 409 MobiDBLite consensus disorder prediction 1 15 - -
Pral943g00069 409 Gene3D - 182 406 - -
Pral943g00069 409 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 404 - -
Pral943g00069 409 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
Pral943g00069 409 MobiDBLite consensus disorder prediction 88 136 - -
Pral943g00069 409 FunFam C2H2-like zinc finger protein 190 405 - -
Pral943g00069 409 MobiDBLite consensus disorder prediction 90 136 - -
Pral943g00069 409 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00069 Pral-Chr943 400763 403407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00069 1 407 C2H2 Transcription Factor Family AT1G75710 61.935 1.37e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral943g00069 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00069 - - gmx:100816726 580.096