Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00058 ATGCTAAATATGCGTTGTTTACACAAATCGAAAAGAGTTTCGTGGGCCTCAGATTTAGATCTTTGTCAGGTTAGATTATTTTTATCAGAGGAATGTCCTTCACAAGTTGGGTTAAATGCTCAAGATCACCTCCAAGCAAAGACATCGTTACTGTCGCATCCAGGAGGGGCAGGTTCTGATGACATTCTACCTCCTGGCTTTGATGGAACTGAATCCTCAAGTCAGACGCAGATAAAGCTCTCCCAGATTCCAGTGATTAAATGGACCAATCCGCTTAAGATTGTGCTTGATCTCACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAGAATCAGAGAGAGATGAAAGTACTCGAAGCTATTTATCCCCGCCCGTCTTCCATTCCTCCAAACCCCTCTGTCTCAATGGATGCAGAAGACTCCCTTTGCAATGATGATCATACTGCTTTGATACCAATTACACCAATTGAAGATGAGGATTCCACAGTAGAGGCATCATATGGAGCGCCGCTTAGTTCACAGCCTCTCTTGTTCGTTGCTGGAGTACCCAAGGGTTCTAACCCTCCTTCAATTGCGCAATTACCTCATGTAGTAGAATCTGAGGCTGCTGAAGCATCTATAGCTTTAAGCCACATCATGAAGAATAATGAACATGGAATTACGATTGACCACGAATTACTGAATAAAGTTCTCAGCAACCCAGAGGTGATTGAAAAGTTGGTTAGAGATTATGGAAATACAAATAACTCACGACATACATTCAATGCTAGCTCATCTTTGGTGACTTCACGTCTACCCATTCCTCTGAATCAAGCTGAAGCCAGTACGCCTTCATTTGGTGCCTTATCAGCCAGCCCTTCCTATACCGCTCAGATGGGGGTTGGAGTGGGACCCGTTCCTCCTCAACAGGTCCCTCCTCCTGTAGTGAGTCTTGGAGCTCCTCCAGCAAAGGATGTGAACTACTATAAAAGCCTAATTCAGCAACATGGTGGAGAAAAACAAGAGACTCTACCTTATCTGAATAACATTAGGCAGCCCGTTGGAAACCAGGAGACAACGCACAATTCTAGATTAAGGGAACCAAAACCCAAGATAATGAAGCCTTGTATCTATTTCAACAGTTCAAAAGGATGTCGGAATGGAGCTAACTGTGCATATCAGCATGATGTGGCATTTCAGCCCCGTAGTAGTGCTGTGCCAGGTGTACAAAGTTCAAAGAGAACCAAAATGGATAACGAGATTAGCAGTTGGTTAGACTCTTGA 1275 0.4416 MLNMRCLHKSKRVSWASDLDLCQVRLFLSEECPSQVGLNAQDHLQAKTSLLSHPGGAGSDDILPPGFDGTESSSQTQIKLSQIPVIKWTNPLKIVLDLTWQVVAGEESKEVEDQNQREMKVLEAIYPRPSSIPPNPSVSMDAEDSLCNDDHTALIPITPIEDEDSTVEASYGAPLSSQPLLFVAGVPKGSNPPSIAQLPHVVESEAAEASIALSHIMKNNEHGITIDHELLNKVLSNPEVIEKLVRDYGNTNNSRHTFNASSSLVTSRLPIPLNQAEASTPSFGALSASPSYTAQMGVGVGPVPPQQVPPPVVSLGAPPAKDVNYYKSLIQQHGGEKQETLPYLNNIRQPVGNQETTHNSRLREPKPKIMKPCIYFNSSKGCRNGANCAYQHDVAFQPRSSAVPGVQSSKRTKMDNEISSWLDS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00058 424 MobiDBLite consensus disorder prediction 401 424 - -
Pral943g00058 424 ProSiteProfiles Zinc finger C3H1-type profile. 367 395 IPR000571 GO:0046872
Pral943g00058 424 MobiDBLite consensus disorder prediction 50 74 - -
Pral943g00058 424 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 275 416 - -
Pral943g00058 424 MobiDBLite consensus disorder prediction 399 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00058 Pral-Chr943 322377 326115 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral943g00058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00058 - - pcin:129303333 677.167