Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00057 ATGGGAAAATCTATTTCCTGCTTCAAATTAATCACATGCGGCAGTACTGAGGCGGACGGCAACGGCAATTACCAAGCGTCTGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAGTCTGCAAGGCATCGTGTTCTTAGCAATGCTGTAATAACAGATACCCCATCTTCAGCAAACAAGGAGAGCTCAGAATGTACTAGTATCAATTTCCAACCATCAACTGAGACAAATATTGCTGAAAAGAGAAACACAACAAATTGCCCTGATGAGAAACCCCCTCCATTATCTGTGGCAAGCTCACAATTATCTGTGGCAAGCTCACAATTATCTGAAACAGTTGTTACTGAAACAGAGAGTAGGGTGGATGTCAATCCACCGGAGTCTGTGGTTATCACCATTCAAGCTGCCATCAGAGGGTTCATGGCTCAGGGAGCCTTGCTAAAGCTTAAGAACGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTCGAAGGCATGCAGTAGGATCTCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAGCTCCTCGTGCGCGCTCGTCATGCTCAGCATTTGCGTCAAGATAAGCATGGCAAAATTAATGGCTCTGAAATTTTGGGTAATGGAAATCAGGTGAGCAAGTCAAGTATGAAGTCCACTTCCATAGAGAAACTGCTTAGCAATCGATTTGCTCATCAGCTGTTGAAATCCACCCCAAAAAACAAACCAATCCGTATCACATGTGATCCTTCCAAAGCTGATTCTGGTTGGAAATGGTTGGAGAGATGGATGTCGGTTTCCTCCTTGGATTCTGCCGAGTCTAAAATAACAAGTTCATTGGTGGAGCAATCAGACAACAATGAATCTAGTCCTTCTCCGTCTCAATTGGAAACTGGGCTTCAGTCTGAAGTTTTGTGTCAGTCAGATGACTCAAGGCTCGCTGTTGAGGACTCTGTTGTGCCTTCTGAGGTTGAAGAGAAAGTGACTACTCATGATACAGGAAACTTAAGCTTCGAAGAAACCCATTCTACGTCTCTTGCCAAAGATGATTTGGAAGAGGCACAGCCTGACATGACAATTACTTTTGATGCTAAAGTAACCTTAGAAGAAATTGATTCTCAGCAAAATAAAATTGTGACATCAGATGCAATTCCTCCTCAGGAGCTTAGTTCTCTACCGGAGAAACCTGAAATTGACAGTGAACAGCCCAAAAGATCCATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAGGGAACCAAATTTGGGTATGGATCAAGAAAGGCCAGCAACCCAACATTCATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTACAATGGCAAGTTCAGGAAGGTCAAGCAGTTTGTCCAATAATGATGCAACTGTTGAAGCGCATGAGGATCCCATTTCTGTTGGCACAGACAGTGCATTTAGGTCCAAAGAGCTCTTATTGGAGAGTTCTGCTCCCTTTCCTTCCAAGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACGCTTGATTCACCAGAAATATCTGAGACTGGGGCTACTGAAAATGAACCTGAAGCCAAAGATTTATCAGAAGGGATATGTAATCCTGACAGTGTGATAAATCATGAGGTTGAGGCTAATGTCTTTTGTACCACTCTCGCTGGTGAGTTACCCGGCTCTGCACTGGGTCAACCTGAGACTGCCAATAATGAAGATGTGAATGGCAAATCACTTCATTCAGCAGTAGTTGTTGATTCCAAAGAGCCACCAGCTCTTAAGTGTGAGAAAAACATGTCTGAACTGCAAAGAGAACAAGTGGAGTCTGCTGTGCAAGATCTCAGAGCATCTCCTGAAGCTTCACCCAGGAGCCATGTAACCGTCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTATCAGTGAAACCAAAAGAGAGAAAACCTGAGAAGACTGGATCTGGATCGACAAATAGACGAAGGCTTCTGTCAGCTGGTAATAAATCACCTGCAAATGCAACTCCTGATTCAGGATCTAGAGGTAGCAGGGAACAACTGCCTAAAGATCAGGGGAATGGGAAGAGGCGCAATTCCTCTGGCTCTGCGAAACCTGATCACAGTGATCAAGAATCAAGAGATAATAGTAACAATAGTTCTCTTCCTCATTTCATGCAAGCCACAGAATCTGCAAGGGCCAAGATTAATGCTAATAATTCTCCACGATCAAGTCCAGATCTGCATGATCGAGATGTACATGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGATAGACAGGTTTCTCCACGCATCCAGCGCTCAATTTCTCAGGCACAGCAGGGTACGAAAGGACAAGGTTTACATCCTCCTCATGAGAGGAAGTGGCAGAGGTGA 2412 0.4424 MGKSISCFKLITCGSTEADGNGNYQASEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSSANKESSECTSINFQPSTETNIAEKRNTTNCPDEKPPPLSVASSQLSVASSQLSETVVTETESRVDVNPPESVVITIQAAIRGFMAQGALLKLKNVVKLQAAVRGHLVRRHAVGSLRCVQAIVKLQLLVRARHAQHLRQDKHGKINGSEILGNGNQVSKSSMKSTSIEKLLSNRFAHQLLKSTPKNKPIRITCDPSKADSGWKWLERWMSVSSLDSAESKITSSLVEQSDNNESSPSPSQLETGLQSEVLCQSDDSRLAVEDSVVPSEVEEKVTTHDTGNLSFEETHSTSLAKDDLEEAQPDMTITFDAKVTLEEIDSQQNKIVTSDAIPPQELSSLPEKPEIDSEQPKRSMKRFASEQLETEGTKFGYGSRKASNPTFIAAQSKFEELSTMASSGRSSSLSNNDATVEAHEDPISVGTDSAFRSKELLLESSAPFPSKIGGSECGTELSISSTLDSPEISETGATENEPEAKDLSEGICNPDSVINHEVEANVFCTTLAGELPGSALGQPETANNEDVNGKSLHSAVVVDSKEPPALKCEKNMSELQREQVESAVQDLRASPEASPRSHVTVPESQGTPSSQVSVKPKERKPEKTGSGSTNRRRLLSAGNKSPANATPDSGSRGSREQLPKDQGNGKRRNSSGSAKPDHSDQESRDNSNNSSLPHFMQATESARAKINANNSPRSSPDLHDRDVHVKKRHSLPGASATDRQVSPRIQRSISQAQQGTKGQGLHPPHERKWQR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00057 803 ProSiteProfiles IQ motif profile. 152 181 IPR000048 GO:0005515
Pral943g00057 803 MobiDBLite consensus disorder prediction 322 355 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 58 87 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 629 646 - -
Pral943g00057 803 Pfam IQ calmodulin-binding motif 134 146 IPR000048 GO:0005515
Pral943g00057 803 Pfam IQ calmodulin-binding motif 154 171 IPR000048 GO:0005515
Pral943g00057 803 MobiDBLite consensus disorder prediction 324 338 - -
Pral943g00057 803 Pfam Protein of unknown function (DUF4005) 708 786 IPR025064 -
Pral943g00057 803 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Pral943g00057 803 Gene3D - 130 177 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 660 702 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 58 101 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 493 538 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 767 790 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 505 524 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 562 803 - -
Pral943g00057 803 PANTHER IQ-DOMAIN 5-RELATED 1 769 - -
Pral943g00057 803 SMART iq_5 129 151 IPR000048 GO:0005515
Pral943g00057 803 SMART iq_5 152 173 IPR000048 GO:0005515
Pral943g00057 803 MobiDBLite consensus disorder prediction 383 410 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 282 305 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 717 746 - -
Pral943g00057 803 MobiDBLite consensus disorder prediction 747 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00057 Pral-Chr943 313065 319433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00057 117 803 IQD Protein Family AT1G19870 37.393 4.68e-100 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00057 - - gmx:100799424 892.108