Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00054 ATGGGAAAATCTATTTCCTGCTTCAAATTAATCACATGCGGCAGTACTGAGGCGGACGGCAACGGCAATTACCAAGCGTCTGAGATCAAAGATTCAAGTGACAAACGAGGTTGGAGTTTCCGAAAAAAGTCTGCAAGGCATCGTGTTCTTAGCAATGCTGTAATAACAGATACCCCATCTTCAGCAAACAAGGAGAGCTCAGAATGTACTAGTATCAATTTCCAACCATCAACTGAGACAAATATTGCTGAAAAGAGAAACACAACAAATTGCCCTGATGAGAAACCCCCTCCATTATCTGTGGCAAGCTCACAATTATCTGTGGCAAGCTCACAATTATCTGAAACAGTTGTTACTGAAACAGAGAGTAGGGTGGATGTCAATCCACCGGAGTCTGTGGTTATCACCATTCAAGCTGCCATCAGAGGGTTCATGGCTCAGGGAGCCTTGCTAAAGCTTAAGAACGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCATTTGGTTCGAAGGCATGCAGTAGGATCTCTGCGTTGTGTTCAAGCCATAGTTAAATTGCAGCTCCTCGTGCGCGCTCGTCATGCTCAGCATTTGCGTCAAGATAAGCATGGCAAAATTAATGGCTCTGAAATTTTGGTGAGCAAGTCAAGTATGAAGTCCACTTCCATAGAGAAACTGCTTAGCAATCGATTTGCTCATCAGCTGTTGAAATCCACCCCAAAAAACAAACCAATCCGTATCACATGTGATCCTTCCAAAGCTGATTCTGGTTGGAAATGGTTGGAGAGATGGATGTCGGTTTCCTCCTTGGATTCTGCCGAGTCTAAAATAACAAGTTCATTGGTGGAGCAATCAGACAACAATGAATCTAGTCCTTCTCCGTCTCAATTGGAAACTGGGCTTCAGTCTGAAGTTTTGTGTCAGTCAGATGACTCAAGGCTCGCTGTTGAGGACTCTGTTGTGCCTTCTGAGGTTGAAGAGAAAGTGACTACTCATGATACAGGAAACTTAAGCTTCGAAGAAACCCATTCTACGTCTCTTGCCAAAGATGATTTGGAAGAGGCACAGCCTGACATGACAATTACTTTTGATGCTAAAGTAACCTTAGAAGAAATTGATTCTCAGCAAAATAAAATTGTGACATCAGATGCAATTCCTCCTCAGGAGCTTAGTTCTCTACCGGAGAAACCTGAAATTGACAGTGAACAGCCCAAAAGATCCATGAAAAGATTTGCCTCTGAGCAACTAGAGACTGAGGGAACCAAATTTGGGTATGGATCAAGAAAGGCCAGCAACCCAACATTCATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTACAATGGCAAGTTCAGGAAGGTCAAGCAGTTTGTCCAATAATGATGCAACTGTTGAAGCGCATGAGGATCCCATTTCTGTTGGCACAGACAGTGCATTTAGGTCCAAAGAGCTCTTATTGGAGAGTTCTGCTCCCTTTCCTTCCAAGATTGGTGGCTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACGCTTGATTCACCAGAAATATCTGAGACTGGGGCTACTGAAAATGAACCTGAAGCCAAAGATTTATCAGAAGGGATATGTAATCCTGACAGTGTGATAAATCATGAGGTTGAGGCTAATGTCTTTTGTACCACTCTCGCTGGTGAGTTACCCGGCTCTGCACTGGGTCAACCTGAGACTGCCAATAATGAAGATGTGAATGGCAAATCACTTCATTCAGCAGTAGTTGTTGATTCCAAAGAGCCACCAGCTCTTAAGTGTGAGAAAAACATGTCTGAACTGCAAAGAGAACAAGTGGAGTCTGCTGTGCAAGATCTCAGAGCATCTCCTGAAGCTTCACCCAGGAGCCATGTAACCGTCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTATCAGTGAAACCAAAAGAGAGAAAACCTGAGAAGACTGGATCTGGATCGACAAATAGACGAAGGCTTCTGTCAGCTGGTAATAAATCACCTGCAAATGCAACTCCTGATTCAGGATCTAGAGGTAGCAGGGAACAACTGCCTAAAGATCAGGGGAATGGGAAGAGGCGCAATTCCTCTGGCTCTGCGAAACCTGATCACAGTGATCAAGAATCAAGAGATAATAGTAACAATAGTTCTCTTCCTCATTTCATGCAAGCCACAGAATCTGCAAGGGCCAAGATTAATGCTAATAATTCTCCACGATCAAGTCCAGATCTGCATGATCGAGATGTACATGTTAAGAAGAGACACTCCTTGCCTGGTGCAAGTGCAACTGATAGACAGGTTTCTCCACGCATCCAGCGCTCAATTTCTCAGGCACAGCAGGGTACGAAAGGACAAGGTTTACATCCTCCTCATGGTATTCTGAATCCTAAAGAATTTTCTTTGGTTCTGTTTTTTATTTCTCCCTGA 2430 0.4387 MGKSISCFKLITCGSTEADGNGNYQASEIKDSSDKRGWSFRKKSARHRVLSNAVITDTPSSANKESSECTSINFQPSTETNIAEKRNTTNCPDEKPPPLSVASSQLSVASSQLSETVVTETESRVDVNPPESVVITIQAAIRGFMAQGALLKLKNVVKLQAAVRGHLVRRHAVGSLRCVQAIVKLQLLVRARHAQHLRQDKHGKINGSEILVSKSSMKSTSIEKLLSNRFAHQLLKSTPKNKPIRITCDPSKADSGWKWLERWMSVSSLDSAESKITSSLVEQSDNNESSPSPSQLETGLQSEVLCQSDDSRLAVEDSVVPSEVEEKVTTHDTGNLSFEETHSTSLAKDDLEEAQPDMTITFDAKVTLEEIDSQQNKIVTSDAIPPQELSSLPEKPEIDSEQPKRSMKRFASEQLETEGTKFGYGSRKASNPTFIAAQSKFEELSTMASSGRSSSLSNNDATVEAHEDPISVGTDSAFRSKELLLESSAPFPSKIGGSECGTELSISSTLDSPEISETGATENEPEAKDLSEGICNPDSVINHEVEANVFCTTLAGELPGSALGQPETANNEDVNGKSLHSAVVVDSKEPPALKCEKNMSELQREQVESAVQDLRASPEASPRSHVTVPESQGTPSSQVSVKPKERKPEKTGSGSTNRRRLLSAGNKSPANATPDSGSRGSREQLPKDQGNGKRRNSSGSAKPDHSDQESRDNSNNSSLPHFMQATESARAKINANNSPRSSPDLHDRDVHVKKRHSLPGASATDRQVSPRIQRSISQAQQGTKGQGLHPPHGILNPKEFSLVLFFISP 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00054 809 MobiDBLite consensus disorder prediction 500 519 - -
Pral943g00054 809 ProSiteProfiles IQ motif profile. 152 181 IPR000048 GO:0005515
Pral943g00054 809 MobiDBLite consensus disorder prediction 319 333 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 277 300 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 58 87 - -
Pral943g00054 809 Pfam IQ calmodulin-binding motif 134 146 IPR000048 GO:0005515
Pral943g00054 809 Pfam IQ calmodulin-binding motif 154 171 IPR000048 GO:0005515
Pral943g00054 809 Pfam Protein of unknown function (DUF4005) 703 781 IPR025064 -
Pral943g00054 809 MobiDBLite consensus disorder prediction 624 641 - -
Pral943g00054 809 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Pral943g00054 809 Gene3D - 130 177 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 762 785 - -
Pral943g00054 809 PANTHER IQ-DOMAIN 5-RELATED 1 764 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 378 405 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 488 535 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 712 741 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 58 101 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 557 794 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 742 760 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 655 697 - -
Pral943g00054 809 MobiDBLite consensus disorder prediction 317 350 - -
Pral943g00054 809 SMART iq_5 129 151 IPR000048 GO:0005515
Pral943g00054 809 SMART iq_5 152 173 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00054 Pral-Chr943 313063 318162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00054 117 784 IQD Protein Family AT1G19870 37.518 3.51e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00054 - - aprc:113847201 874.389