Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00052 ATGAATACTTTCGAATATAGACCCTGTAAGTCAATGGAAGGTAATCAAAGCATCGACGCCGGCAGTACGGGTATGCAGCGAATCAGTTCCGCATTTGTTTCCTCCTCGGGTGCTACTCCGAGGCCACAGAACCGATTCGGTGCTCCCGGTCCCAATTTCAGTGCCTCTCAAATGGGTGCGCCTGCGTTTCTGATGCAACAAAACTTGAGTCCTGAGAATCTGAAACCTGGTATACCTCCATCCCACCCTAATATCCCAACGTCTCCGCATTATTCCCCAATTTCAGAGTTCCAATCAGCTTCCCAGCAATTACGTTCCCCGAATATGAGACCGCGCTCTTCCCATTCACGGTCTTTGTCTCAACAATCATTTTTTTCCCCGGATTGCTTGCCTCCATTGAGTCCTTCCCTTTATTGTGAGCCCTCGGCAACCCCTCTTTCTAACTCGATTTCCACAGACGTGTCCATGGAAGAAAGTGTGGTTAACTCTCATGGCCCCGGCATTTCTATGCCCGTCAATAGGGATCACACCTTTCAGGCTGGTCCTAGTGTTCTTCCTCGTAAAGGGCACAGGCGCTCCTGCAGTGATACTCCGTTAGGAATCTCTGGCTTCATTCAATCTTCTCCTCAGTTGCTTCCCTCTCCTGCCTGGATGAATTTGGACAGTTCAATTTCTAGAGGAGAGAGCTCGGGATTGCAGAAGCCAATTCAGTTGGTAAAAAAGGAGCCAAAAAAGGACGAGGGTCAAGTTGATCGTTACAATGCAAAACCTTTAGGTGAGAGGAAAGAGGATGTGATGGATGATTTAATTAGCGTGTATATGAATTTGGACAACTTTGATAGTTTGAACGTATCTGGTGCGGAAGAATCGAAGACTTTTGAAAGCAGTGATAATGAAGCTGAGAGTCTCGTAAGTGGAAAAACAACCTCTACGCAAGGGGCAACTTCGGGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGATATTGCACCAGGTTCTCGACATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGGAATTTGCACATTGGAGATGAATCACCGAAACTTCCTCCATTGGGGAATGGAGTTGGTCAGCGCTCACCTAGCAATTCGGGAGATGGTAAAACATCTGAAATCAACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAACGATAAACTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAAAAGAATATTGGCTAATCGTCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACCAAATTGCAGCGGGATAACTCACAGCTTAAAACCGAGAATAGTGAGTTGAAATTCCGACTTCAAGCCATGGAGCAACAGTCCCAGCTGAAAGATGCTCTGAATGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTGCAGTCACGGAACTTGGTGGAGAGTCTATTCTCTCGGGTTGCATAGCTCGCCAACGTGCTATAAATCAACAAAGGTTCCAATTGCAACACGAGCAGCCTGGCCAGCTCAAACGTCCAGAAATGCAAAATCAGCCTCAGGGGGAGACCCAGACTCAGTCGCACTAG 1689 0.4671 MNTFEYRPCKSMEGNQSIDAGSTGMQRISSAFVSSSGATPRPQNRFGAPGPNFSASQMGAPAFLMQQNLSPENLKPGIPPSHPNIPTSPHYSPISEFQSASQQLRSPNMRPRSSHSRSLSQQSFFSPDCLPPLSPSLYCEPSATPLSNSISTDVSMEESVVNSHGPGISMPVNRDHTFQAGPSVLPRKGHRRSCSDTPLGISGFIQSSPQLLPSPAWMNLDSSISRGESSGLQKPIQLVKKEPKKDEGQVDRYNAKPLGERKEDVMDDLISVYMNLDNFDSLNVSGAEESKTFESSDNEAESLVSGKTTSTQGATSGFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGVGQRSPSNSGDGKTSEINMELRNGEFTELELKKIMENDKLAEIALSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDNSQLKTENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLAVTELGGESILSGCIARQRAINQQRFQLQHEQPGQLKRPEMQNQPQGETQTQSH 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00052 562 MobiDBLite consensus disorder prediction 59 74 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 1 42 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 238 254 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 533 562 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 369 384 - -
Pral943g00052 562 SMART brlzneu 413 477 IPR004827 GO:0003700|GO:0006355
Pral943g00052 562 MobiDBLite consensus disorder prediction 1 125 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 88 125 - -
Pral943g00052 562 Pfam bZIP transcription factor 417 475 IPR004827 GO:0003700|GO:0006355
Pral943g00052 562 MobiDBLite consensus disorder prediction 290 317 - -
Pral943g00052 562 Coils Coil 433 453 - -
Pral943g00052 562 SUPERFAMILY Leucine zipper domain 417 472 IPR046347 GO:0003700|GO:0006355
Pral943g00052 562 MobiDBLite consensus disorder prediction 222 254 - -
Pral943g00052 562 MobiDBLite consensus disorder prediction 290 384 - -
Pral943g00052 562 CDD bZIP_plant_RF2 418 468 IPR044759 GO:0003700|GO:0006355
Pral943g00052 562 Coils Coil 468 488 - -
Pral943g00052 562 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 102 559 - -
Pral943g00052 562 Gene3D - 415 477 - -
Pral943g00052 562 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 415 478 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00052 Pral-Chr943 300762 303822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00052 25 512 bZIP Transcription Factor Family AT4G38900 46.628 4.97e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral943g00052 bZIP_1 1.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00052 - - pcin:129302979 963.37