Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00050 ATGGAAGGTAATCAAAGCATCGACGCCGGCAGTACGGGTATGCAGCGAATCAGTTCCGCATTTGTTTCCTCCTCGGGTGCTACTCCGAGGCCACAGAACCGATTCGGTGCTCCCGGTCCCAATTTCAGTGCCTCTCAAATGGGTGCGCCTGCGTTTCTGATGCAACAAAACTTGAGTCCTGAGAATCTGAAACCTGGTATACCTCCATCCCACCCTAATATCCCAACGTCTCCGCATTATTCCCCAATTTCAGAGTTCCAATCAGCTTCCCAGCAATTACGTTCCCCGAATATGAGACCGCGCTCTTCCCATTCACGGTCTTTGTCTCAACAATCATTTTTTTCCCCGGATTGCTTGCCTCCATTGAGTCCTTCCCTTTATTGTGAGCCCTCGGCAACCCCTCTTTCTAACTCGATTTCCACAGACGTGTCCATGGAAGAAAGTGTGGTTAACTCTCATGGCCCCGGCATTTCTATGCCCGTCAATAGGGATCACACCTTTCAGGCTGGTCCTAGTGTTCTTCCTCGTAAAGGGCACAGGCGCTCCTGCAGTGATACTCCGTTAGGAATCTCTGGCTTCATTCAATCTTCTCCTCAGTTGCTTCCCTCTCCTGCCTGGATGAATTTGGACAGTTCAATTTCTAGAGGAGAGAGCTCGGGATTGCAGAAGCCAATTCAGTTGGTAAAAAAGGAGCCAAAAAAGGACGAGGGTCAAGTTGATCGTTACAATGCAAAACCTTTAGGTGAGAGGAAAGAGGATGTGATGGATGATTTAATTAGCGTGTATATGAATTTGGACAACTTTGATAGTTTGAACGTATCTGGTGCGGAAGAATCGAAGACTTTTGAAAGCAGTGATAATGAAGCTGAGAGTCTCGTAAGTGGAAAAACAACCTCTACGCAAGGGGCAACTTCGGGCTTTGTGGAGGAAAGGAGGGAAGGAATCAAGAGGAGTTCTAATGGGGATATTGCACCAGGTTCTCGACATCGGAGAAGTTTTTCCTTGGATAGTTCTATAGGGAATTTGCACATTGGAGATGAATCACCGAAACTTCCTCCATTGGGGAATGGAGTTGGTCAGCGCTCACCTAGCAATTCGGGAGATGGTAAAACATCTGAAATCAACATGGAGTTGAGAAATGGTGAATTCACTGAACTGGAGCTAAAAAAAATAATGGAAAACGATAAACTTGCTGAGATTGCTTTGTCAGATCCCAAGCGTGCAAAAAGAATATTGGCTAATCGTCAATCAGCTGCTCGATCCAAGGAGCGGAAGGTGCAGTACATTGCTGAACTGGAGCACAAGGTGCAAACTCTTCAGTCAGAGACAACCACAATGTCTACTCAATTTACCAAATTGCAGCGGGATAACTCACAGCTTAAAACCGAGAATAGTGAGTTGAAATTCCGACTTCAAGCCATGGAGCAACAGTCCCAGCTGAAAGATGCTCTGAATGAGACCTTAACTGCTGAAGTCCAGCGTTTGAGGCTTGCAGTCACGGAACTTGGTGGAGAGTCTATTCTCTCGGGTTGCATAGCTCGCCAACGTGCTATAAATCAACAAAGGTTCCAATTGCAACACGAGCAGCCTGGCCAGCTCAAACGTCCAGAAATGCAAAATCAGCCTCAGGGGGAGACCCAGACTCAGTCGCACTAG 1656 0.4698 MEGNQSIDAGSTGMQRISSAFVSSSGATPRPQNRFGAPGPNFSASQMGAPAFLMQQNLSPENLKPGIPPSHPNIPTSPHYSPISEFQSASQQLRSPNMRPRSSHSRSLSQQSFFSPDCLPPLSPSLYCEPSATPLSNSISTDVSMEESVVNSHGPGISMPVNRDHTFQAGPSVLPRKGHRRSCSDTPLGISGFIQSSPQLLPSPAWMNLDSSISRGESSGLQKPIQLVKKEPKKDEGQVDRYNAKPLGERKEDVMDDLISVYMNLDNFDSLNVSGAEESKTFESSDNEAESLVSGKTTSTQGATSGFVEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNLHIGDESPKLPPLGNGVGQRSPSNSGDGKTSEINMELRNGEFTELELKKIMENDKLAEIALSDPKRAKRILANRQSAARSKERKVQYIAELEHKVQTLQSETTTMSTQFTKLQRDNSQLKTENSELKFRLQAMEQQSQLKDALNETLTAEVQRLRLAVTELGGESILSGCIARQRAINQQRFQLQHEQPGQLKRPEMQNQPQGETQTQSH 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00050 551 FunFam probable transcription factor PosF21 405 458 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 279 306 - -
Pral943g00050 551 Gene3D - 404 466 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 48 63 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 211 243 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 279 373 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 358 373 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 1 115 - -
Pral943g00050 551 SUPERFAMILY Leucine zipper domain 406 461 IPR046347 GO:0003700|GO:0006355
Pral943g00050 551 Coils Coil 422 442 - -
Pral943g00050 551 MobiDBLite consensus disorder prediction 77 115 - -
Pral943g00050 551 Coils Coil 457 477 - -
Pral943g00050 551 CDD bZIP_plant_RF2 407 457 IPR044759 GO:0003700|GO:0006355
Pral943g00050 551 MobiDBLite consensus disorder prediction 1 31 - -
Pral943g00050 551 Pfam bZIP transcription factor 406 464 IPR004827 GO:0003700|GO:0006355
Pral943g00050 551 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 93 548 - -
Pral943g00050 551 SMART brlzneu 402 466 IPR004827 GO:0003700|GO:0006355
Pral943g00050 551 MobiDBLite consensus disorder prediction 227 243 - -
Pral943g00050 551 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 404 467 IPR004827 GO:0003700|GO:0006355
Pral943g00050 551 MobiDBLite consensus disorder prediction 522 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00050 Pral-Chr943 300471 303822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00050 14 501 bZIP Transcription Factor Family AT4G38900 46.628 3.50e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral943g00050 bZIP_1 1.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00050 - - pcin:129302979 941.799