Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00041 ATGAAGATCCTGTGCGACGTCTGTAATAACCACGAGGCTTCCCTCTTCTGTACTGCCGACGAAGCCGCCCTATGCGATGCCTGCGACCACCGGGTCCACCATGCCAACAAGCTCGCCTCCAAGCACCAACGCCTTTCTCTCCACCGCCCTTCTCCCAACCAATTCCCTCTCTGCGATATTTGCCTGGAGAGAAGAGCTTTCGTGTTCTGTCAAGAGGACAGAGCAATTCTATGCAAAGATTGTGACACGCCGATTCACTCGGCCAACGAGCACACCCGGAAGCACAATAGGTTTCTTCTAACGGGGATTAAGCTCTCTGCTGCTGCTACGCTTTATGCACCATCAACCTCCAATCCTGTTTTGACAAACGGTTCTGATTCCATATCTAATTCCAAGTCGCAGAAGTTGGCAAAGAACTCCATTTCTGCATCTTCTGCCATCTCACATCCCGCTTCAATGGACAAGACTTCACCTTCGGCAGCATCAACACATACCACAATTAACAAGGCTGGGGGAAACTTGTCAACGAACGAAGGGGTTGTTTCCACAAGTAGCATATCTGAGTATTTGATAGAGACTCTCCCTGGCTGGCAGGTGGACGACTTTCTCGATTCTTCCGCTGTTCCGTTTGGTTTCAGTAAGAGTAATGATATGTCGGCTGTGTTCGATGCTGATATTGAGCGAAATATGGGTTCTTTCTCTGCCGAGAGTATGGGGATCTGGGTTCCTCAGGCACCCACTACTTTCTTTACCCCACAAGTGGATCGGCAGATCAAGTTCCAAGAGACAAAAGAGGCGACCAATATTGAGGCCAGCAGATCAATGTCGAGGGATGATAATTTCATAGTTCCACAAATCAACCCTCCTATTGGGTCCAAGAGATCCAGACTTCTTTGGTAG 900 0.49 MKILCDVCNNHEASLFCTADEAALCDACDHRVHHANKLASKHQRLSLHRPSPNQFPLCDICLERRAFVFCQEDRAILCKDCDTPIHSANEHTRKHNRFLLTGIKLSAAATLYAPSTSNPVLTNGSDSISNSKSQKLAKNSISASSAISHPASMDKTSPSAASTHTTINKAGGNLSTNEGVVSTSSISEYLIETLPGWQVDDFLDSSAVPFGFSKSNDMSAVFDADIERNMGSFSAESMGIWVPQAPTTFFTPQVDRQIKFQETKEATNIEASRSMSRDDNFIVPQINPPIGSKRSRLLW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00041 299 MobiDBLite consensus disorder prediction 144 174 - -
Pral943g00041 299 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pral943g00041 299 SMART bboxneu5 53 100 IPR000315 GO:0008270
Pral943g00041 299 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Pral943g00041 299 CDD Bbox1_BBX-like 57 100 - -
Pral943g00041 299 FunFam B-box zinc finger protein 21 1 98 - -
Pral943g00041 299 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pral943g00041 299 CDD Bbox1_BBX-like 4 47 - -
Pral943g00041 299 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Pral943g00041 299 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Pral943g00041 299 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 289 - -
Pral943g00041 299 Gene3D Classic Zinc Finger 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00041 Pral-Chr943 234973 236610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00041 1 299 C2C2-CO-like Transcription Factor Family AT1G75540 43.440 2.84e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pral943g00041 zf-B_box 6.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00041 - - tcc:18591484 359.762