Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00036 ATGGCTGGGTTCTTCTCTCTAGGCCCACAGAACAGACAAGAAGAAGAAAAACCAGATAACAACAACAGTAGCAGCTTATTCTTGTTCAGGAACGAGGAGATCTACAGCAAAGGATTGGAGATATGGCCACAGTCTTATCAGCCGCATCACAACTTGAACAACTACTACTCTTTTGGGGCGGGTCCTAGTCGCAGAAGCTCCTCCAACGACGACGTCGTCTCTGACGACTCTACGAGGTTCGGATTCACGGTGATGAGGTCTGGAGGCCTAGGAGGTGGCATGAACTGTCAGGATTGTGGGAACCAGGCTAAGAAGGACTGTGCACATCTCAGATGCAGGACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCAGACCCACGTCAAGAGCACTTGGGTTCCCGCAGCTAAACGCCGTGAACGACAGCAACAACTCGCTGCGTTGCAGCAACAGCAGCAGCAGGACCAACAATTTAGGGGAGATTATTCGAAACGACACAGAGATGGTCAAGCTTCAGGCTCTCTTGCCTGCGCTCCGTTAATGCCAATTGCCACAACAGGGTTGGAGCTGGGGCAATTCCCACCAGAGGTGAACTCTCCGGCTGTGTTTCGGTGTGTGAGAGTAAGCGCGATGGACAGTCCAGAGGACCAGTACGCGTATCAAACGGCTGTGAACATCGGTGGTCACCTTTTCAAGGGAATTCTGTATGACCAAGGCCCTGAAGGTGCTTACACCACAGGTGGCGAGAGCTCCTCCGGCGGAGCTGAAGCTCAACAATTAAATCTCATAACCGCGTCGACCACCACGAACACGGCTATTACCAGCGCCAACCCATTTGATTCATCTTCACTATACCCGGCTCCGCTCAGTGCCTTCATGGCTGGTACGCAATTCTTCCCACCTCCAAGGTCCTAA 912 0.5252 MAGFFSLGPQNRQEEEKPDNNNSSSLFLFRNEEIYSKGLEIWPQSYQPHHNLNNYYSFGAGPSRRSSSNDDVVSDDSTRFGFTVMRSGGLGGGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQQQQQQDQQFRGDYSKRHRDGQASGSLACAPLMPIATTGLELGQFPPEVNSPAVFRCVRVSAMDSPEDQYAYQTAVNIGGHLFKGILYDQGPEGAYTTGGESSSGGAEAQQLNLITASTTTNTAITSANPFDSSSLYPAPLSAFMAGTQFFPPPRS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00036 303 MobiDBLite consensus disorder prediction 142 157 - -
Pral943g00036 303 NCBIfam putative zinc finger domain, LRP1 type 95 137 IPR006510 -
Pral943g00036 303 MobiDBLite consensus disorder prediction 138 170 - -
Pral943g00036 303 Pfam Domain of unknown function (DUF702) 93 240 - -
Pral943g00036 303 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 288 IPR007818 GO:0003700|GO:0006355
Pral943g00036 303 NCBIfam LRP1 C-terminal domain 191 239 IPR006511 -
Pral943g00036 303 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00036 Pral-Chr943 199893 202536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00036 1 303 C2H2 Transcription Factor Family AT1G75520 46.978 4.47e-86 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pral943g00036 DUF702 8.8e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00036 - - gmx:100807290 400.593