Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00035 ATGGCGGATGGAGGCTGTTGGCCGACAATGGATCTGCTTCGTTCGGAGCCAATGCAACTTGTGCAACTTATCATTCCAACTGAATCAGCTCACCGAGCTATCTTTTATCTTGGAGATCTTGGCCTCTTCCAGTTCAAAGATCTAAATGCGGAGAAAAGCCCATTTCAACGGACATATGCTGCTCAGATTAAAAGGTGTGGGGAAATGGCACGTAAGCTTCGGTTCTTTAGGGAACAAATGACAAAGTCTGGTGTATCAATCTTAAGAAGGTCCACAGAAGAAACTGAAGTTGATCTGGATAAACTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTGGAGGTTAATGTGAATAATGAGAAGTTGCAACACACCTACCGTGAACTATTAGAGTATGAGCTTGTTCTACAGAAGGCTGGTGAATTTTTCTCTTTAGCTAAAAATAGCGCTGCAGCCCACCAAAGAGAGCTTGAAGTCCAGGACACGTTTGAAGGTTCTATTGACAATCCATTATTATCAGAAAAAGAGTCACCAACAGATCTACCAAAGCAGCTTAAGCTGCGTTTCATCAGTGGTCTTGTTCCTAGAGAAAAATCAATGGCATTTGAAAGAATGTTATTTCGTGCTACAAGGGGTAATGTGTTTCTAAAGCAAGTTGCGGTCGAGAATCCTGTTCTCGATCCTTTGTCAGCAGAGAAGATTTATAAAAATGTATTTGTAATATTTTATTCTGGAGAGAGAGCAAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCGAATCGCTACCCATTCACTGATGATCTGGGTAAACAATATCAGATGACTACAGAGGTGTCAGGAAGACTTTCTGAATTGAAGACTACTATTGAGGTTGGATTGTTGCACCGTAGCACTCTTCTGCAGACAGTTGGTTGTTACTTTGAGCAGTGGAGCCTTCTGGTGAAGAAGCAAAAATCGATTTTCCACACTCTAAATATGCTTAGCATTGATGTAACAAAGAAATGCCTTGTAGCAGAAGGTTGGTGTCCTGTTTTTGCAACCGATAAGATTCAAGCTGCATTGCACCGGGCAAACATGGACAGTAACTCCCAAGTTGGGGTGATATTTCAAGTCTTACAAACAAAGGAATCACCACCTACATATTTCCAGACAAATAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAGTTGCTAAGTATCGGGAGGCAAACCCTGGAGTATATACTATTATCACCTTTCCGTTCCTCTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGCCTATTACTAGCAACTTTATATCTCATAATTAGGGAGAAGAAATTTTCTACTCAGAAACTTGGAGACATAATAGAAATGACTTTTGGTGGTCGCTATGTTATTATGATGATGGCCCTTTTCTCAATATACACAGGACTGATATATAATGAGTTTTTCTCTGTCCCATTTGAACTATTTGGGCGATCAGCTTATGGATGCCGTGATCTTTCATGCAGGGATGCAACCACAACAGGCTTAATAAAGGTGCGTGGCACTTATCCATTTGGCGTGGATCCTAAGTGGCATGGAACACGGAGTGAGTTGCCATTTCTTAACTCCTTGAAGATGAAGATGTCTATCCTAGTGGGAGTAGCCCAGATGAATCTTGGAATTATATTAAGCTACTACAATGCCAAGTACTTTGGGGATGACATAAATATCTGGTACCAGTTTGTTCCCCAAATGTTATTCCTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTGTTAAATGGTGCACAGGATCACAAGCTGACTTGTATCATGTGATGATATACATGTTCCTCAGTCCAACTGATGATCTTGGTGAAAACCGGCTCTTTGTTGGCCAAAATTTCCTTCAACTTGTGTTACTATTGTTGGCACTTGTTGCTGTACCATGGATGTTGTTTCCAAAGCCTTATCTCCTTAAGAAGCAGCACCAACAAAGGCATCAAGGTCAATCTTACTCTTTGCTTTATAGCAGCGATGACCCTCTTGAATCAGAGCCACATATTTACCCCCATGGCCATGATGAGTTTGAGTTCAGTGAGGTTTTTGTACATCAACTTATTCATACAATAGAATTTGTGCTTGGGGCAGTGTCTAATACAGCTTCATACCTACGGTTATGGGCCCTCAGTCTGGCACATTCAGAGTTGTCAAGTGTGTTCTATGACAAGGTTCTTCTTCTGGCCTGGGGGTTCAACAACATCACTGTTCTCATTGTTGGCATTATTGTCTTCATATGTGCTACTGTTGGTGTCCTGCTGGTTATGGAAACTCTGAGTGCTTTTTTGCATGCATTGCGGCTTCACTGGGTGGAGTTCCAGAATAAGTTTTATGAGGGAGATGGCTACAAGTTCAGCCCATTTTCATTTGCTTTGCTTAATGAAGAGGATGAAGTATAG 2457 0.4103 MADGGCWPTMDLLRSEPMQLVQLIIPTESAHRAIFYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMARKLRFFREQMTKSGVSILRRSTEETEVDLDKLEVKLAELEAELLEVNVNNEKLQHTYRELLEYELVLQKAGEFFSLAKNSAAAHQRELEVQDTFEGSIDNPLLSEKESPTDLPKQLKLRFISGLVPREKSMAFERMLFRATRGNVFLKQVAVENPVLDPLSAEKIYKNVFVIFYSGERAKSKILKICDAFGANRYPFTDDLGKQYQMTTEVSGRLSELKTTIEVGLLHRSTLLQTVGCYFEQWSLLVKKQKSIFHTLNMLSIDVTKKCLVAEGWCPVFATDKIQAALHRANMDSNSQVGVIFQVLQTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYLIIREKKFSTQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYGCRDLSCRDATTTGLIKVRGTYPFGVDPKWHGTRSELPFLNSLKMKMSILVGVAQMNLGIILSYYNAKYFGDDINIWYQFVPQMLFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENRLFVGQNFLQLVLLLLALVAVPWMLFPKPYLLKKQHQQRHQGQSYSLLYSSDDPLESEPHIYPHGHDEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNITVLIVGIIVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFALLNEEDEV 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00035 818 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral943g00035 818 Coils Coil 92 126 - -
Pral943g00035 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral943g00035 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00035 Pral-Chr943 186596 193495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00035 10 817 Primary Pumps ATPases(2) AT4G39080 74.907 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00035 K02154 - twl:120009931 1312.36