Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00032 ATGGGAATTGAGGAACGCAGGCAGGTGAAACGGCCTGCCCAGGCCAGCTCCAGAAAAGGCTGTATGAGAGGCAAAGGAGGCCCTGAGAACGCCAGCTGCACCTACAAAGGCGTCCGTCAGAGGACTTGGGGCAAATGGGTCGCCGAAATCCGCGAGCCCAACCGCGGCGCCCGCCTCTGGCTCGGCACCTTCGAGACTTCCCATGAAGCTGCTTTGGCTTACGACGCCGCCGCTCGCAAGCTCTACGGCTCCGAGGCCAAGCTCAACCTTCCCGACCTCTCTCTCAATTCTCATTCCCAGCCTGATCCCCCGCATTCCTCTGTCCCCTCTCAGGTTCCTCAAATGGCGCCCAATCACCAGCCTATGCCAGATCATCAGCTGCTCCACAACTCTGCTGCTCATATCCCTCCCTGCTCCTTCAACCCCATCCCCAATAATTCTCCGATGATGTCCGCCATGGCTTCTCATCAGCAAGTTGCACCAGCGTACAGCCCTAACTCTAGCTCTAGCTCTGGCTCGACCATGTCCGTTCCCTTCAACGCCGAGGAGAACCTGATGAAGCCGATTGAGAAGGAGGAGGATTTCGGTCAATTGTGGGGAACGATGAGCGAGGGCCTGCCTGTCCCTGAGTTCGATGATTCCATCTGGGCCGAAGCTGCCATGTCTCTGGATTTTCCTGTAATGTCTGATGCGGGAATATATGGGAATGGGACTTTGGGAGATGTGGCTCCCTGGGACTCTCTGCAGACTCCCTGGTGCATGTGA 765 0.5739 MGIEERRQVKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSEAKLNLPDLSLNSHSQPDPPHSSVPSQVPQMAPNHQPMPDHQLLHNSAAHIPPCSFNPIPNNSPMMSAMASHQQVAPAYSPNSSSSSGSTMSVPFNAEENLMKPIEKEEDFGQLWGTMSEGLPVPEFDDSIWAEAAMSLDFPVMSDAGIYGNGTLGDVAPWDSLQTPWCM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00032 254 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Pral943g00032 254 MobiDBLite consensus disorder prediction 1 33 - -
Pral943g00032 254 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Pral943g00032 254 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Pral943g00032 254 MobiDBLite consensus disorder prediction 92 117 - -
Pral943g00032 254 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Pral943g00032 254 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 195 - -
Pral943g00032 254 MobiDBLite consensus disorder prediction 92 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00032 Pral-Chr943 155852 156665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00032 10 110 AP2-EREBP Transcription Factor Family AT1G75490 76.699 3.05e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral943g00032 AP2 8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00032 - - gmx:100797850 287.73