Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00020 ATGGACTCGCCCAGTGGAAATTCCTCCATGTCCACCAAATTTCAGAGCTCTGGGTCTGAAGAGGACTTGCAGGCTTTGATGGATCAGAGAAAAAGGAAGAGAATGCAATCGAATCGGGAATCGGCAAAGCGATCCCGCATGCGAAAGCAGAAGCACCTGGACGATCTGATGGGCCAGGTGAGTGAGCTTAAAAAGGAGAATAGCGAAATCCTCACGAGCATAAACATCACCACGCAGCACTATGTGAAAGTTGAGGCTGAAAACTCCGTATTGAGGGCTCGAATGGCAGAGCTCAGCCACAGGCTCCAATCGCTGAACGACATCCTCAGTTACATCAACACCAGCACGGGGGTGTATGAAGCCGATTGCTACTCAATGAGAGCAGATAACTTTATGAACCCCATGGACACGCCCTTGCTTAACCAGCCCATTGTGGCTTCTGCAGACTTTTTTCAGTGGTGA 462 0.4978 MDSPSGNSSMSTKFQSSGSEEDLQALMDQRKRKRMQSNRESAKRSRMRKQKHLDDLMGQVSELKKENSEILTSINITTQHYVKVEAENSVLRARMAELSHRLQSLNDILSYINTSTGVYEADCYSMRADNFMNPMDTPLLNQPIVASADFFQW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00020 153 Coils Coil 81 101 - -
Pral943g00020 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 148 - -
Pral943g00020 153 MobiDBLite consensus disorder prediction 1 54 - -
Pral943g00020 153 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Pral943g00020 153 MobiDBLite consensus disorder prediction 24 54 - -
Pral943g00020 153 Pfam bZIP transcription factor 30 86 IPR004827 GO:0003700|GO:0006355
Pral943g00020 153 FunFam BZIP transcription factor 28 80 - -
Pral943g00020 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Pral943g00020 153 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Pral943g00020 153 MobiDBLite consensus disorder prediction 1 23 - -
Pral943g00020 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Pral943g00020 153 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Pral943g00020 153 Gene3D - 28 82 - -
Pral943g00020 153 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00020 Pral-Chr943 87552 89132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00020 24 153 bZIP Transcription Factor Family AT4G34590 54.676 9.33e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral943g00020 bZIP_1 3.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00020 K25786 - vvi:100855209 207.223