Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral943g00018 ATGCGTAGGAATGCTGGTAACTTGAACCAAATCGTCCAGGAAGCAGCCTCCAGATCACGAGATTCAACTCTCAACAGTTGTATGATCCAAAATTTAGAATTCCGCGGTGGTGCAGAAAGCTGGTTAATAAAGGAAGAGATGTGCACAGAAACGCTAAACGACTGGGAACAACACTACCGGGGGTTTCAGGAGTCAACAGATCATTTGAATTGTGTTAGAGAGAAGCCTTTGCTTAACACCCTCGCTTCCTCAGATTTCTACTCCACCAGTGCTGGTGGATTGGGAGCATCAAGTAGGGGCTACTTCAGCCAGATTCATCCCACTATCAACATCTCTAATTTAAACCACTCGTCCCCAGCAATTTCACGGACCTCATCCGACATGAGATTCAATGCCTCATCAGAGCCATTAAGCTCATCAACACTTGGTGCAGATTCCTGCCTTTCTTTACATTTGCAGAACCACGTTGACCGGTCCTCGACGTATAGCTCTAGTACTGTTGGGAAAGAGAAAGTAGGAGACAGGATAGCGGCACTTCAGCAGCTGGTGGCTCCTTTTGGCAAGACCGACACAGCGTCAGTGCTGATGGAGGCTATTGGATACATCAAATTCCTTCAAAGCCAAGTTGAGACGCTCAGCGTTCCATACATGAAGAAGTCATCACGGAATCAGAACAGCAGAGCGATGCAAAGGGGTTGGGGCAAAGACGACGTCGCAGGGCAGTCGACAGAGGAAGACCTTAGAAGCCGAGGACTCTGTCTCGTCCCCTTGTCCCGCACGTCCACTGCAGTGTGGCACCCCGACAACCTGTGA 813 0.4932 MRRNAGNLNQIVQEAASRSRDSTLNSCMIQNLEFRGGAESWLIKEEMCTETLNDWEQHYRGFQESTDHLNCVREKPLLNTLASSDFYSTSAGGLGASSRGYFSQIHPTINISNLNHSSPAISRTSSDMRFNASSEPLSSSTLGADSCLSLHLQNHVDRSSTYSSSTVGKEKVGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKKSSRNQNSRAMQRGWGKDDVAGQSTEEDLRSRGLCLVPLSRTSTAVWHPDNL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral943g00018 270 CDD bHLH_AtbHLH_like 169 213 IPR045239 -
Pral943g00018 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Pral943g00018 270 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 118 261 - -
Pral943g00018 270 MobiDBLite consensus disorder prediction 220 242 - -
Pral943g00018 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 221 IPR036638 GO:0046983
Pral943g00018 270 Gene3D - 169 230 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral943g00018 Pral-Chr943 68705 70872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral943g00018 156 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 64.220 5.61e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral943g00018 - - pcin:129318806 181.415