Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral940g00004 ATGCAGGCTGCCAACTTCTTTGAGCTCTTACTTGTGGCATTAACTTGTTTCCAGTTTCTGGGAATTTCTCATGAGTCAAAGTTACCTCAAGATGAAGTTCATGCTCTTCAAGAAATTACAAGAACAATGGGAGCAAGCTATTGGAAGATTAATGATTCCTGCGGAATCGATACAGTTGATGTAACACAGGAACTCTCTCCTGGATCAGAGAGAAGGCTAGAATGTGACTGCAAATTTGAAAACAACACAGTCTGCCATGTTGTAAAAATGACTCTCAAGCGCCTTAGCCTCCCCGGCATGCTTCCAGCTCAACTGGTCAAGCTACCCTATCTTCAAGAAATAGATTTTGCTTACAATCTCTTTACTGGTACTATTCCAAAGGAATGGGCTTCGATGAATCTAACTTCAATCTCTCTTCTTGTGAACCGCTTATCAGGGGAAATTCCTAAGCATCTAGGGAATATTACTTCTCTCACATACCTGATGCTTGAAGCAAACCAATTTTCTGGGGTCATTCCTCCTGAGCTTGGGAGCCTAATCAAGTTGCAGACGTTGGTACTGTCATCCAATCAATTGACCGGGGACTTACCAGGGACCCTTGCTGGGTTGCAGAATTTGACTGACTTTAGGATAAATAATAACAACTTCAATGGAAGCATACCTAACTTCATACAAAACTGGAAGCTTCTGCAAAGACTAGAAATGCATGCAAGTGGACTAAAGGGACCAATCCCATCAAATGTATCATTTTTGGAGAAATTAAAACAGCTGAGAATCAGTGACATAAATAGTCCTAGTCAAGGTTTTCCTTTGCTGAAAAACATGCCATACATGGAAATATTAGTTTTGAGGAACTGTAACCTTACTGGGGAGATACCTTCGTACATCTGGAGAATGATGAATTTGATAACATTGGATGTCAGTTTTAATAAGATATTTGGGCACATTCCACCAGTTATATATACCAGACGTCTGAGATATATGTACCTTACAGGAAATATGCTAAGTGGAAATGTACCAGAAATCTTGAACGGTGGAAGTAGCATTGATCTTTCGTACAACAACTTTACTTGGCAAGGCCCCGAGCAACCTGCTTGTCAGGATAACAGGAACTTGTATCTGAATTTGTTCAGAAGCTTTAAAAAGAAGAACAAGTTAGAAGAATATGTCCCTTGCTTAGAGAATTTCAATTGTCAACAGTATTCAACTTGCTTGCACATAAATAGTGGTGGGATGGATGTAAAGATAACAGAAAATAAGGGTGAACACCTTTATTTAGGGGATGGAAATGTTGGCGGCGGTTCAGCAACATACTACTATAGCAGCAGTGATAACTGGGGGTTCAGTAGTACTGGAGACTTCATGGATGATTTTGAATCCCAGAATATAAGATACACTGTATCTCTGCCATCTTCAAATATGCCTGAACTATATTCGACAGCTCGTATATCTCCACTTTCACTTACTTATTTCCATAATTGCATGGAGAATGGGAACTACACTGTAAATCTCCACTTTTCTGAAATACAGTTCACAAATGATAATACATATACAAGTCTGGGGAAGCGCATATTTGATATCTATGTTCAGGAACAATTAATTCGGAAGGATTTAAATATTGAGAGTGAGACAAAAGTTGCTCAAAAACCACTGATATTGCCGATATATAATGTCAGTGTCACAAATAATGTCTTGGAGATCCGGTTCCAATGGGCAGGAAAAGGAACAACTAGAATTCCTGATATAGGAGTTTATGGTCCCATTGTGTCAGCATTGTCTTTTTTTTCTGATTCCAGACCTTGCTCAAATGGTGGAAAGAATGGTGTTAATAAGTTCATTGCAATCGGAAGCGCTGCTCTATGCTTAGTGCTTTTTATGGCAGGGATCATTTGGTGGAAAGGCTGTTTCAAAGGAGAACTCCAAAAGACAGAAGATATTCAGTCGGGAACTTTCAGCGTCAAACAGTTGAGAGCGGCCACTAATGACTTCTCTTATGATAATAAAATTGGAGAAGGCGGTTTTGGTCCTGTGTACAAGGGTCAGTTACCTGATGGTACTGTTATAGCAGTCAAGCAACTATCATCAATGTCACGGCAGGGAAATCGTGAATTTCTAAATGAAATAGGCCTAATATCTTGTTTGCAACATCCTAACCTTGTGAAACTTTATGGATCTTGCATTGAAGGGGATCAACTACTGTTGGTATATGAGTACATGGAAAATAATAACCTTGCCCGTGCTTTATTTGGCAATGAAAACAATCGGATTCAACTGGATTGGCCCACAAGAGTTAGGATCTGCATTGGCATTGCAAAAGGTCTTGCATTCCTTCACGAAGAGTCAAGGCTCAGGATTGTGCACAGAGATATCAAGGCTACTAATGTGTTACTCGATGGCAATTTAAATCCTAAAATATCGGATTTTGGTTTGGCAAAGCTTAATGAAGAAGAGAAGACACATATCACGACTCGAGTTGCTGGAACTATAGGATATATGGCGCCGGAATATGCATTATGGGGCCATCTAACATATAAGGCAGATGTTTACAGTTTTGGTGTCCTAGCCTTAGAAATTGTTACTGGAAAAAGCAATAACAATTATGTGCCAGATAATGGAGCTGTTTGTCTTCTAGAGTGGGCGTGCCAGTTGCAACAAAGTGGAAAGTTAATGGAGTTGGTAGATGAAAGAATGGGGTCAATGGGTGATGAAAGGGAAGCAGAAAAAGTGCTCAAAGTAGCTCTTCTGTGCACAAATGCATCACCATCACTCAGGCCCGCAATGTCTGAGGTTATAAATATGCTTGAAGGACGAATGGATATTCCAGAGGCAGTTCCAGAAGCTGGTGCTTACAATGAAGACTTGAGGTTTAAAGCCTTGAGAGATCTTGATCAATGGTCAAGGCAGAGTTTGAATGGAAGCCAGACTCAATCTTCAGTGTCACTCCATACCTTCAGCTTAGAATCCGTCAATACTTTAACGGGTTGTTCTACGGATCATCAGTTAGTCCACAAAAGTGAGATTTCACCTTCAAAGGCTAGTTCAACACTATGA 3051 0.4009 MQAANFFELLLVALTCFQFLGISHESKLPQDEVHALQEITRTMGASYWKINDSCGIDTVDVTQELSPGSERRLECDCKFENNTVCHVVKMTLKRLSLPGMLPAQLVKLPYLQEIDFAYNLFTGTIPKEWASMNLTSISLLVNRLSGEIPKHLGNITSLTYLMLEANQFSGVIPPELGSLIKLQTLVLSSNQLTGDLPGTLAGLQNLTDFRINNNNFNGSIPNFIQNWKLLQRLEMHASGLKGPIPSNVSFLEKLKQLRISDINSPSQGFPLLKNMPYMEILVLRNCNLTGEIPSYIWRMMNLITLDVSFNKIFGHIPPVIYTRRLRYMYLTGNMLSGNVPEILNGGSSIDLSYNNFTWQGPEQPACQDNRNLYLNLFRSFKKKNKLEEYVPCLENFNCQQYSTCLHINSGGMDVKITENKGEHLYLGDGNVGGGSATYYYSSSDNWGFSSTGDFMDDFESQNIRYTVSLPSSNMPELYSTARISPLSLTYFHNCMENGNYTVNLHFSEIQFTNDNTYTSLGKRIFDIYVQEQLIRKDLNIESETKVAQKPLILPIYNVSVTNNVLEIRFQWAGKGTTRIPDIGVYGPIVSALSFFSDSRPCSNGGKNGVNKFIAIGSAALCLVLFMAGIIWWKGCFKGELQKTEDIQSGTFSVKQLRAATNDFSYDNKIGEGGFGPVYKGQLPDGTVIAVKQLSSMSRQGNREFLNEIGLISCLQHPNLVKLYGSCIEGDQLLLVYEYMENNNLARALFGNENNRIQLDWPTRVRICIGIAKGLAFLHEESRLRIVHRDIKATNVLLDGNLNPKISDFGLAKLNEEEKTHITTRVAGTIGYMAPEYALWGHLTYKADVYSFGVLALEIVTGKSNNNYVPDNGAVCLLEWACQLQQSGKLMELVDERMGSMGDEREAEKVLKVALLCTNASPSLRPAMSEVINMLEGRMDIPEAVPEAGAYNEDLRFKALRDLDQWSRQSLNGSQTQSSVSLHTFSLESVNTLTGCSTDHQLVHKSEISPSKASSTL 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral940g00004 1016 ProSiteProfiles Protein kinase domain profile. 663 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral940g00004 1016 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Pral940g00004 1016 SUPERFAMILY Protein kinase-like (PK-like) 646 936 IPR011009 -
Pral940g00004 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Pral940g00004 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 972 - -
Pral940g00004 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Pral940g00004 1016 Gene3D Ribonuclease Inhibitor 268 386 IPR032675 -
Pral940g00004 1016 SMART serkin_6 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral940g00004 1016 Gene3D Transferase(Phosphotransferase) domain 1 739 944 - -
Pral940g00004 1016 CDD STKc_IRAK 669 936 - -
Pral940g00004 1016 Gene3D - 400 598 - -
Pral940g00004 1016 Gene3D Ribonuclease Inhibitor 34 197 IPR032675 -
Pral940g00004 1016 Gene3D Ribonuclease Inhibitor 198 267 IPR032675 -
Pral940g00004 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 196 - -
Pral940g00004 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 385 - -
Pral940g00004 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 597 - -
Pral940g00004 1016 SUPERFAMILY L domain-like 83 357 - -
Pral940g00004 1016 Pfam Malectin domain 404 592 IPR021720 -
Pral940g00004 1016 Gene3D Phosphorylase Kinase; domain 1 636 738 - -
Pral940g00004 1016 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 738 - -
Pral940g00004 1016 Pfam Protein tyrosine and serine/threonine kinase 665 934 IPR001245 GO:0004672|GO:0006468
Pral940g00004 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral940g00004 Pral-Chr940 14914 25534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral940g00004 5 829 Receptor kinase-like Gene Family AT1G29750 58.273 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral940g00004 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral940g00004 - - qsa:O6P43_032037 1406.35