Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral935g00009 ATGCAAACTCAGAATATGTCATTTTCCTGTGCAAAGAACTTCTTCCAGAGGTTCTGTTTAGATGAAATCAATATGGGAAGTTTTTCTCATAGCAACTTTCTGTCTAATGATCTTCTTCCATCTCTTGGAGCCCAAATGGTGCAGGAAATCAAACTCCGAAGATACATAATCTCCCCTTTCGATCCGAGATATAGGGCTTGGGAGATGATTCTGGTAGTTCTTGTCATTTACTCGGCCTGGATATGCCCCTTTGAGTTTGCCTTTCTGTCTACAAAGCAAGATGCATTGTTCATCATCGACAACGTTGTTGATGGCTTCTTTGCCATTGACATCGTGCTCACATTCTTTGTTGCATATTTAGATAGTCACTCTCACCTCCTTGTTGATGATCCCTGGAAAATTGCGATCAGGTACATATCTACCTGGTTTATTTTTGACGTCTGCTCAACAGCACCATTTCAGTCCATCAGCCTTCTCTTCACAAACCATAGCAGTGAGCTTGGCTTTGACCTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGAGTCAGCTCTCTGTTTGCAAGACTTGAGAAAGACATTCGCTTTAACTATTTCTGGACCAGGTGCATAAAACTCACTGCCGTGACACTGTTTGCTGTTCACTGTGCCGGTTGCTCTTGCTATCTAATTGCAGAGAAGTATCCTGATTCCAAAAGGACCTGGATTGGTGCAACGCAGCCAAATTTCAAAGAAGAAGATCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTAACACTTACCACTACTGGCTACGGGGATTTACATGCTCAAAACCCTGCGGAGATGCTGTTTGATACTGTGTTCATGCTATTCAATTTGGGATTAACATCATACATCATTGGAAACATGACGAACCTTGTGGTTCACTGGACCAGCCACACCAAAACTTTTAGAGATACGATTAGAGCAGCATCAGAGTTTGCATCAAGGAATCATCTGCCGCATCACCTACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAACAACAAGAAACATTAAATGCTCTGCCCAAGGCAATTCGTTCAAGCATCGCAAATCATCTCTTCTTTCCTATAGTGAAGGAAGTCTACCTATTCCATGGAGTTTCCCATGACTTCCTTTTCCAACTGGCCTCAGAAATGGAAGCTGAGTATTTTCCACCCAAGGAAGATGTGATACTGCAAAATGAGGTTCCTACAGATTTTTGCGTGCTAGTTTCAGGGGCAGTGGATTTTGTTCGCCAAATGGATGGGTATAATCAAGTTGTGAGGAAGGCAGTTTTAGGAGAAACATTTGGAGAGATTGGGATATTAACCCACAGGCCACAACCATTCACTATCCGGACTGCAGAGCTCTCTCAAATTTTACGACTCAACAAAACTTCGTTACTGAAGGCTTTTGAAGCTTATCCAGAAGATTCAAAAATCATAATGGATAACCTTGTCATGAGATTAAAGGGACAAGAAGGCTTGGGCTTTGAGTATCCAAATGCAGAACCTGGACTGGTCCCTCATGGAAAACTGGATGGAGTGAAAGCGAGAGAAAGCTTTTCTCATGCATACACAAACAGTTCACTCCAGGATTCATTAGTCCAAGAAGGAAGGTACAGAAACTTCACAGACTCGGAGATTACATTGCACAAGGTGACAACTGAAAATGGAGTAAGGGATACTCATGCTGTTACATTCAAAGGGCATCCAGAGATGGTTGACATACTTCTAGAAAGAAATGCAAATGCAAAGCACTCGAATTTCGTTGGTTGGAAATCAAAAACTCAGGTGGAACAGCAAGATCACAAGAGCAATTCTAACCTCTTCATTAATTGTGGAGATAGGGAGAGATCAGATGAATATAGAATAGACTTTGAGGAGCCAGATAGGTTAAACCATGTTAGGAACGACACAACCAGAGACAGAAAACATGAAGATCCCAGATCATTTAACTACCCTTTAGAGAGTGTATATAAAAATTCTTATCCGAGCAATCCTAACTGTCCTAGCGATAGAGAAGTGGCTAGATTCAAGAAGAAGAGAGTCACGATTCACTTGATAGGCCAAAGCAGCAGTACTTCACGCGGACAGCGCGGGAAGTTGATTATTCTGCCTGATTCAATACAAGAGCTGCTCAAGATTGCTGAAGAAAAGTTTGCGGGATCAAAACCTACAAGAGTTATTAATACAGAGAAAGCAGAGATAGATGACATAAGCGTCATTCGAGATGGTGATCATCTTTATTGTAGCGATAATGAAAACTTGCAGTCATTATGA 2319 0.4161 MQTQNMSFSCAKNFFQRFCLDEINMGSFSHSNFLSNDLLPSLGAQMVQEIKLRRYIISPFDPRYRAWEMILVVLVIYSAWICPFEFAFLSTKQDALFIIDNVVDGFFAIDIVLTFFVAYLDSHSHLLVDDPWKIAIRYISTWFIFDVCSTAPFQSISLLFTNHSSELGFDLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLTAVTLFAVHCAGCSCYLIAEKYPDSKRTWIGATQPNFKEEDLWDRYVTAIYWSIVTLTTTGYGDLHAQNPAEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSHTKTFRDTIRAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNALPKAIRSSIANHLFFPIVKEVYLFHGVSHDFLFQLASEMEAEYFPPKEDVILQNEVPTDFCVLVSGAVDFVRQMDGYNQVVRKAVLGETFGEIGILTHRPQPFTIRTAELSQILRLNKTSLLKAFEAYPEDSKIIMDNLVMRLKGQEGLGFEYPNAEPGLVPHGKLDGVKARESFSHAYTNSSLQDSLVQEGRYRNFTDSEITLHKVTTENGVRDTHAVTFKGHPEMVDILLERNANAKHSNFVGWKSKTQVEQQDHKSNSNLFINCGDRERSDEYRIDFEEPDRLNHVRNDTTRDRKHEDPRSFNYPLESVYKNSYPSNPNCPSDREVARFKKKRVTIHLIGQSSSTSRGQRGKLIILPDSIQELLKIAEEKFAGSKPTRVINTEKAEIDDISVIRDGDHLYCSDNENLQSL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral935g00009 772 SUPERFAMILY cAMP-binding domain-like 309 502 IPR018490 -
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral935g00009 772 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Pral935g00009 772 Gene3D Jelly Rolls 375 507 IPR014710 -
Pral935g00009 772 SMART cnmp_10 382 499 IPR000595 -
Pral935g00009 772 Pfam KHA, dimerisation domain of potassium ion channel 694 762 IPR021789 -
Pral935g00009 772 CDD CAP_ED 382 495 IPR000595 -
Pral935g00009 772 FunFam Potassium channel KAT2 370 506 - -
Pral935g00009 772 ProSiteProfiles KHA domain profile. 695 772 IPR021789 -
Pral935g00009 772 Pfam Cyclic nucleotide-binding domain 402 486 IPR000595 -
Pral935g00009 772 Gene3D - 65 305 - -
Pral935g00009 772 PANTHER POTASSIUM CHANNEL AKT1 30 506 IPR045319 GO:0005249|GO:0006813
Pral935g00009 772 SUPERFAMILY Voltage-gated potassium channels 59 304 - -
Pral935g00009 772 FunFam Potassium channel KAT3 66 306 - -
Pral935g00009 772 Gene3D Helix hairpin bin 306 372 - -
Pral935g00009 772 Pfam Ion transport protein 65 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral935g00009 Pral-Chr935 69269 74156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral935g00009 1 768 Ion Channels AT4G18290 57.792 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral935g00009 K21867 - gmx:100811356 1034.63