Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral930g00004 ATGGCAAGGCAAGATAAGTCAGGCACAAGTAAAAACAGCTTAGAGAACTTGCTGGACTTGGACAAAACAAGAGCCGCGCAAAGCATTGCGAAGCAACTGAGATCCCACAGGTCCATTCCTGAACATGGTCTAGAATTCAAGAACATATCATATTGTGTCCAGAAGAAGCAAAAGAATAATGGTGTTTGGATCAAGAAAGAAGCTTATCTCCTTCATGACATATCTGGGCAGGCAAACAGAGGTGAAGTCATGGCTATCATGGGACCAAGTGGGGCTGGCAAATCAACATTCCTCGATGCCTTGGCTGGTCGGATTGCACAAGGGAGCCTTGAAGGATCAGTTAGAATGGATGGAAAACCAGTCAGTGCAAGTTACTTGAAGATGGTATCATCGTATGTGATGCAAGATGACCAACCTTTTCCTATGTTGACAGTTTTTGAGACATTCATGTTTGCAGCAGAGGTTAGGCTTCCTCCTACACTCTCCAGGGAGGATAAAAAGAACAGAGTTCATGAGCTCCTCGATCAGCTCGGCCTGCAGAGTGCAGCACATACATATATTGGTGATGAAGGGACAAGAGGAGTGTCGGGAGGGGAAAAAAGAAGAGTATCTATTGGCATAGACATCATTCACAAGCCTGCGCTTCTGTTTCTTGACGAACCAACCTCAGGTCTCGATTCTACAAGTGCTTACAATGTAGTGGAAAAGATTAAACACATAGCTCAAGGTGGAAGTATTGTCCTCATGACCATACATCAGCCTTCATTCAGAATTCAAAAGCTCCTCGACCAGATCGCTATCCTTGCAAGGGGTAGACTGATATACATGGGAAGGCCAGATGCACTGCCCGCTTATCTTTCTGGTTTTGGAAGAACAATACCAGATGGAGAAAATAGCATTGAATACATGTTAGATGTTATTAAAGAATATGATGAATCAACTATTGGTCTAGATCCCCTTGTTCAGTACCAATGCTATGGCCAAAGGCCTGATCAATCAGCCATAACACCAGTCCCTAAAACACCAAAGACTCCAAGAACACCTCACAGAAGTAGCACCCCTGCATCTAAATATATCATCAACTTGCTGTCACAAGGGTTCACTCCCGGTACATCAAAGCCTGACTCCAACCAAGTTGTTGATGATGATGAGAGTTTTGATTACTCGCTTGAGAGGAAAAGTGCTCAGACGCCAAGGAATATGTCCAGTGCTGGTGTCCCACGTTTGGCTTCTCAGTTCTACCAAGAGTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTGTGGTAGGAACTCCTAAACGCCAAGTATCATGGACTCCGGCCAGAACTCCAGCATGGACTCCAGCAAGAACTCCAGGGTGGACACCTGCAAAAACACCTAATTCAGGACCGAGAAGTGTTATTTCCAGCCAACATCCTGCATCTGATCAGGACCCTTATCGGGCCAAGACTTCCAATGTAGTTAGCCAATCTATGGACTTCCATGGACCTTCTTATGAAGAGTTTGAGATTGAAGAAGCTCTTGATGAGCCACATCTAGGATCAAAATATGCAAATCCATGGCTACGTGAGGTTGCAGTGCTGTCATGGAGAACTGCACTCAATGTAATTCGAACACCTGAACTCTTCCTGTCCCGTGAGGTTGTGCTAACCGTTATGGCGCTTATCCTCTCCACCATCTTCAAAAACCTTGGTCATCCCACTTTCAAAGACATAAGTAGGCTTCTCAACTTCTATATCTTTTCAGTGTGCCTAGTTTTCTTCTCTTCCAACGATGCTGTCCCTACTTTCATCTTAGAAAGGTTCGTCTTCATTAAAGAGACATCCCACAATGCTTATCGTGCTTCTTCATATGTAATTTCTTCCCTCATTGTTTATCTCCCATTTTTCGCCATCCAAGGCTTCACATTCGCTGCCATAACCAAAGTATTCCTTCACCTAAAAAGCAGTCTCTTCCATTTTTGGATGATCCTCTTTGCTTCGCTTATCACTACCAATGCCTATGTGATGCTTGTTAGTGCACTTGTTCCAAGCTACATCACAGGGTATGCCGTAGTTATAGCCACAACTGCTCTGTTCTTCTTAACTTGTGGTTTCTTCCTCAAGCGAACTCAAATACCTTTCTATTGGAGGTGGCTCCATTATATTTCTGCAATCAAATATCCATTTGAAGCATTGCTGACAAATGAATTCAAGAATGATAAATGCTACACAGGGAACCTGGCAGATTTGTCTCCTGGTCCTTTAGGAGAAGTGAAGCTAAGCTCCCACCATAACATGTCGCGTAATTGCTTAATAGGAGAAGATGTTTTATCCTCAATGGATATTATTAAAGAAGACATATGGTGCGACATATTTATTCTGCTGGCTTGGGGCGTTCTTTACAGGTTCATATTCTATTTGGTTTTGAGATTTCACTCCAAGAATGAAAGAAAATGA 2445 0.4339 MARQDKSGTSKNSLENLLDLDKTRAAQSIAKQLRSHRSIPEHGLEFKNISYCVQKKQKNNGVWIKKEAYLLHDISGQANRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRMDGKPVSASYLKMVSSYVMQDDQPFPMLTVFETFMFAAEVRLPPTLSREDKKNRVHELLDQLGLQSAAHTYIGDEGTRGVSGGEKRRVSIGIDIIHKPALLFLDEPTSGLDSTSAYNVVEKIKHIAQGGSIVLMTIHQPSFRIQKLLDQIAILARGRLIYMGRPDALPAYLSGFGRTIPDGENSIEYMLDVIKEYDESTIGLDPLVQYQCYGQRPDQSAITPVPKTPKTPRTPHRSSTPASKYIINLLSQGFTPGTSKPDSNQVVDDDESFDYSLERKSAQTPRNMSSAGVPRLASQFYQEFSAKDFSVWLYHGVVGTPKRQVSWTPARTPAWTPARTPGWTPAKTPNSGPRSVISSQHPASDQDPYRAKTSNVVSQSMDFHGPSYEEFEIEEALDEPHLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREVVLTVMALILSTIFKNLGHPTFKDISRLLNFYIFSVCLVFFSSNDAVPTFILERFVFIKETSHNAYRASSYVISSLIVYLPFFAIQGFTFAAITKVFLHLKSSLFHFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPFYWRWLHYISAIKYPFEALLTNEFKNDKCYTGNLADLSPGPLGEVKLSSHHNMSRNCLIGEDVLSSMDIIKEDIWCDIFILLAWGVLYRFIFYLVLRFHSKNERK 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral930g00004 814 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 802 - -
Pral930g00004 814 MobiDBLite consensus disorder prediction 456 483 - -
Pral930g00004 814 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Pral930g00004 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 285 IPR027417 -
Pral930g00004 814 MobiDBLite consensus disorder prediction 331 354 - -
Pral930g00004 814 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Pral930g00004 814 Gene3D - 44 287 IPR027417 -
Pral930g00004 814 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Pral930g00004 814 SMART AAA_5 80 280 IPR003593 GO:0016887
Pral930g00004 814 Pfam ABC-2 type transporter 527 733 IPR013525 GO:0016020|GO:0140359
Pral930g00004 814 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Pral930g00004 814 MobiDBLite consensus disorder prediction 442 483 - -
Pral930g00004 814 CDD ABCG_EPDR 44 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral930g00004 Pral-Chr930 50318 53438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral930g00004 41 282 Calmodulin-binding Proteins AT2G36910 25.681 6.60e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral930g00004 K05681 - gmx:100819497 1219.91