Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral930g00001 ATGGAACGGGATTTTCTGGGTTTGAGTTCAAAGGTTAGTTCAGCGACTAAGAAAGAGGATACTACTGGTAAAGCGAACGAGCCAGTGAGGGGTTTAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCCGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACATCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGGGATCCAGAAAAGTTTGAGCATGGGAAAACAAGTAGGAAATGAACGTGGAATGACAGTATACCCTATGCAACAAGTTGATACACTTTCAGGCTACCATCAAGAAGCCAGAACATTTTCAGTCTCCAACCAGTCAAATCAGAGGAGTCCTATTCTCCAATCTACTGTCAGTACCAATGTTCGGAACATGGTCAATTCTGCCATAAAACCACACCCTCAAGGAGGAGTCCCTCTGATTGCCCCTGTATCTGTTCTTCCATCAAACGGTTACGTTGTTGGTACCACTGACTTAGGGAACTCGTCGAAACCCTCTGGCAAACCTACTCAGCTGACCATATTCTATGCTGGTTCAGTGTGTGTTTATGAAGACATAGCTCCCGAGAAGGCCCAGGCTATTATGTTGCTGGCTGGACATGGGAGTACTCCAAATCAAAACAAATCAGTGTCAACAGCTCCAGTGCAAACACCAAACTACAAGCCTTCTAAAGATGATGGGTTTATTGTAAGCCAATCCCACCATTCACCTTTACCAAGTCCGATTCCCATGTCCTTCCATGTTAGTTCTCAGCCTGTGGGAGGACCTCCTAGCACCAATGAACCAGCAATTGTGAGACCAGTATCATCTTCGGCTGCCCCAAGTTGCAATCTGGAGTCTCCTAGTGTAGCTAGCTCTTCAAAATCTGCAGCGACAAAAGTTGGTTCACCTGTGGACTTGCCTCAGGCGCGCAAAGCATCCTTGGCTCGGTTCTTAGAGAAGCGCAAGGAAAGGGTGACAAGCACATCACCATACCACACAAACAAGAAATCACCAGAATGTGGCAATCAAGGAACGGATAGTATTAGTTTCTCCATCACATCCACCGGTTCTTGTCCCCTACCTGCCATGAACTAG 1125 0.4613 MERDFLGLSSKVSSATKKEDTTGKANEPVRGLGMQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSADAFDSNQKPFMGGIQKSLSMGKQVGNERGMTVYPMQQVDTLSGYHQEARTFSVSNQSNQRSPILQSTVSTNVRNMVNSAIKPHPQGGVPLIAPVSVLPSNGYVVGTTDLGNSSKPSGKPTQLTIFYAGSVCVYEDIAPEKAQAIMLLAGHGSTPNQNKSVSTAPVQTPNYKPSKDDGFIVSQSHHSPLPSPIPMSFHVSSQPVGGPPSTNEPAIVRPVSSSAAPSCNLESPSVASSSKSAATKVGSPVDLPQARKASLARFLEKRKERVTSTSPYHTNKKSPECGNQGTDSISFSITSTGSCPLPAMN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral930g00001 374 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 114 351 IPR040390 -
Pral930g00001 374 MobiDBLite consensus disorder prediction 340 374 - -
Pral930g00001 374 MobiDBLite consensus disorder prediction 65 79 - -
Pral930g00001 374 MobiDBLite consensus disorder prediction 1 32 - -
Pral930g00001 374 MobiDBLite consensus disorder prediction 331 374 - -
Pral930g00001 374 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Pral930g00001 374 MobiDBLite consensus disorder prediction 218 235 - -
Pral930g00001 374 SMART tify_2 181 216 IPR010399 -
Pral930g00001 374 MobiDBLite consensus disorder prediction 218 319 - -
Pral930g00001 374 MobiDBLite consensus disorder prediction 52 79 - -
Pral930g00001 374 Pfam Jas motif 317 341 IPR018467 -
Pral930g00001 374 MobiDBLite consensus disorder prediction 245 309 - -
Pral930g00001 374 Pfam tify domain 184 215 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral930g00001 Pral-Chr930 22240 26082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral930g00001 34 347 Tify Gene Family AT3G17860 38.953 2.86e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral930g00001 tify 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral930g00001 K13464 - gmx:100807288 379.407