Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral927g00008 ATGGATGCAACCATTGTTTTAATGCTCATAGAAGCTGTATTGATTTTGCTGGCAATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCACTTCATGCTACCCATCCTATTTCTGTTGATGATAGTGGTAAGGATGTTGTTGATGATCCGATTCCCACAGTTTCTTCTCCTTCTCATATCATTGATGCTCCTCTTGCAACCAAGTATGACGTCTTTCTTAACTTTAGAGGGGAAGACACGCATGACAACTTCACAAGTTATCTCTATGAAGCACTTTGCGATGCAAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATAACATCTCACCAATTCTTTTGGAAACAATAGAGGAATCAGAGATATCTTTGATTATTTTCTCTAAAGATTATGCCTCTTCAACATGGTGTATGGATGAACTCGTTCATATTATGAAATGTCGGGATAAATACAAAAGGGATGTCATACCTATTTTCTACCACGTTGATCCATCAAATATTCGCAAACAAGAAGGGAGTTTTGGAGATGGATTTGCTAAGCTTAAGCAAAGATTTAAGCACAACGAAGAAAAAGTGCAGGAGTGGAAAAAAGCTTTGAACCAATCAACAAATCTCTCTGGATGGGATTCAAAGAATTTCAGGACTGAACCCAAACTCATCAAAAAGATTGTGAAAGATATTCTGAGCAAATTGAATAGCAAGCCGTCCTTTCATCTAGAAGGATTAGTTGGGATTAGTCATCAAATCCAGAAAATTGAAGAGCTACTCGATGAAGCTCGCATTGTGGGAATATGGGGTATGGGAGGTATGGGTAAGACTACTCTTGCTAGAGCTGTATTCCACAAGTTGAAAGCACAGTTTAACGCTCTCTCCTTTGTTGAAAATGTAAGAAAACAACAAGGAATAATTGGGTTTGACAGATTACAACAAGAATGTCTCAAAGAATTAATAAAAGATGAGGACATTAATGTCTTTGACATAAAATCCACTTTTGTAAGAAATAGGCTTCGACGCAAAAAAATTCTTCTGATACTTGATGATGTGGACAATTCAATACCAGCTGAGGATTTAACTAAAGTGTATCATTGGTTTGGAGAAGGAAGTAGAATTATTCTCACATCAAGAGACATGCAAGTACTTCAAAATGCTTTTGCATTTTCAATATACTCTGTCCCAAGATTGGATTTCCATGACGCCCTTCATCTTTTTAGTTTGAAAGCATTCAAGCAAAATGAGCCATTTAAAAGTTATGTGGAGCTATCAAAATCAGTAGTGGATTATTGTCAAGGAAATCCTTTTGCCCTTGTAAAGTTGGGTTCTTTTCTTCAGGGCAGAGGAAAAGAAGAATGGGAAAGTTCTTTGGAAAAAATAGAAGAAACTCCACCCAATTACATTATTGATGTTCTGAAATTGAGTTTTGATGGACTTGATAGGGACCAGAAGAATATGTTTCTTGACATAGCATTTTTCATCAAGGAAAAAGTTGATGTTTCTTTGGACCTAATAGGACAATTATATGGCTCTTCTGTAGATATTGACGTAAATGTTCTTAAAGACAGATCCCTCACTTCATTTGATCACAATGGCTATATTGAAATGCATAATCTTGTGAGGGACATGGGCGTTGAAATTGCTAGACAACAGTCATTTTCTAATCCTAAAGGCTCTGTTCGACTGCGAAGTCATAGGGACATCTATGATTTTTTCATTTGTAACAAGGTGACTGAGTCTATTCGATGCTTGTCATTGGACATGAGCAAGATAAAAAGGATTCCATTGACAATTAATGACCTTCGAAAGATGCATAATTTAATATTTCTAAAATTTTATTGGTCTGATGGGAGAGGGCCTTCAAAGTTGCTTATGGGTAAAGACATGAGTTATCTTCCAGGTGAACTAATTCAAGGTTGTTAG 1920 0.363 MDATIVLMLIEAVLILLAIAISKAIRLISPLHATHPISVDDSGKDVVDDPIPTVSSPSHIIDAPLATKYDVFLNFRGEDTHDNFTSYLYEALCDANIHTFMDHKLHKGDNISPILLETIEESEISLIIFSKDYASSTWCMDELVHIMKCRDKYKRDVIPIFYHVDPSNIRKQEGSFGDGFAKLKQRFKHNEEKVQEWKKALNQSTNLSGWDSKNFRTEPKLIKKIVKDILSKLNSKPSFHLEGLVGISHQIQKIEELLDEARIVGIWGMGGMGKTTLARAVFHKLKAQFNALSFVENVRKQQGIIGFDRLQQECLKELIKDEDINVFDIKSTFVRNRLRRKKILLILDDVDNSIPAEDLTKVYHWFGEGSRIILTSRDMQVLQNAFAFSIYSVPRLDFHDALHLFSLKAFKQNEPFKSYVELSKSVVDYCQGNPFALVKLGSFLQGRGKEEWESSLEKIEETPPNYIIDVLKLSFDGLDRDQKNMFLDIAFFIKEKVDVSLDLIGQLYGSSVDIDVNVLKDRSLTSFDHNGYIEMHNLVRDMGVEIARQQSFSNPKGSVRLRSHRDIYDFFICNKVTESIRCLSLDMSKIKRIPLTINDLRKMHNLIFLKFYWSDGRGPSKLLMGKDMSYLPGELIQGC 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral927g00008 639 SMART till_3 68 207 IPR000157 GO:0007165
Pral927g00008 639 FunFam Disease resistance protein (TIR-NBS-LRR class) 65 235 - -
Pral927g00008 639 Gene3D - 66 239 IPR035897 -
Pral927g00008 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 489 IPR027417 -
Pral927g00008 639 Pfam TIR domain 68 238 IPR000157 GO:0007165
Pral927g00008 639 ProSiteProfiles TIR domain profile. 67 233 IPR000157 GO:0007165
Pral927g00008 639 SUPERFAMILY "Winged helix" DNA-binding domain 467 567 IPR036390 -
Pral927g00008 639 Coils Coil 180 200 - -
Pral927g00008 639 Gene3D - 240 387 IPR027417 -
Pral927g00008 639 PRINTS Disease resistance protein signature 263 278 - -
Pral927g00008 639 PRINTS Disease resistance protein signature 337 351 - -
Pral927g00008 639 PRINTS Disease resistance protein signature 430 444 - -
Pral927g00008 639 SUPERFAMILY Toll/Interleukin receptor TIR domain 67 210 IPR035897 -
Pral927g00008 639 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 634 IPR044974 GO:0006952
Pral927g00008 639 Gene3D - 396 479 IPR042197 -
Pral927g00008 639 Pfam NB-ARC domain 252 462 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral927g00008 Pral-Chr927 62219 65433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral927g00008 43 635 WRKY Transcription Factor Family AT4G12020 28.856 4.94e-60 216