Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral927g00007 ATGGATGCAACCATTGTTTTAATGCTCATAGAAGCTGTATTGATTTTGCTGGCAATAGCAATTTCTAAAGCTATCAGATTAATCTCTCCACTTCATGCTACCCATCCTATTTCTGTTGATGATAGTGGTAAGGATGTTGTTGATGATCCGATTCCCACAGTTTCTTCTCCTTCTCATATCATTGATGCTCCTCTTGCAACCAAGTATGACGTCTTTCTTAACTTTAGAGGGGAAGACACGCATGACAACTTCACAAGTTATCTCTATGAAGCACTTTGCGATGCAAACATTCATACTTTTATGGATCACAAGCTCCACAAAGGAGATAACATCTCACCAATTCTTTTGGAAACAATAGAGGAATCAGAGATATCTTTGATTATTTTCTCTAAAGATTATGCCTCTTCAACATGGTGTATGGATGAACTCGTTCATATTATGAAATGTCGGGATAAATACAAAAGGGATGTCATACCTATTTTCTACCACGTTGATCCATCAAATATTCGCAAACAAGAAGGGAGTTTTGGAGATGGATTTGCTAAGCTTAAGCAAAGATTTAAGCACAACGAAGAAAAAGTGCAGGAGTGGAAAAAAGCTTTGAACCAATCAACAAATCTCTCTGGATGGGATTCAAAGAATTTCAGGACTGAACCCAAACTCATCAAAAAGATTGTGAAAGATATTCTGAGCAAATTGAATAGCAAGCCGTCCTTTCATCTAGAAGGATTAGTTGGGATTAGTCATCAAATCCAGAAAATTGAAGAGCTACTCGATGAAGCTCGCATTGTGGGAATATGGGGTATGGGAGGTATGGGTAAGACTACTCTTGCTAGAGCTGTATTCCACAAGTTGAAAGCACAGTTTAACGCTCTCTCCTTTGTTGAAAATGTAAGAAAACAACAAGGAATAATTGGGTTTGACAGATTACAACAAGAATGTCTCAAAGAATTAATAAAAGATGAGGACATTAATGTCTTTGACATAAAATCCACTTTTGTAAGAAATAGGCTTCGACGCAAAAAAATTCTTCTGATACTTGATGATGTGGACAATTCAATACCAGCTGAGGATTTAACTAAAGTGTATCATTGGTTTGGAGAAGGAAGTAGAATTATTCTCACATCAAGAGACATGCAAGTACTTCAAAATGCTTTTGCATTTTCAATATACTCTGTCCCAAGATTGGATTTCCATGACGCCCTTCATCTTTTTAGTTTGAAAGCATTCAAGCAAAATGAGCCATTTAAAAGTTATGTGGAGCTATCAAAATCAGTAGTGGATTATTGTCAAGGAAATCCTTTTGCCCTTGTAAAGTTGGGTTCTTTTCTTCAGGGCAGAGGAAAAGAAGAATGGGAAAGTTCTTTGGAAAAAATAGAAGAAACTCCACCCAATTACATTATTGATGTTCTGAAATTGAGTTTTGATGGACTTGATAGGGACCAGAAGAATATGTTTCTTGACATAGCATTTTTCATCAAGGAAAAAGTTGATGTTTCTTTGGACCTAATAGGACAATTATATGGCTCTTCTGTAGATATTGACGTAAATGTTCTTAAAGACAGATCCCTCACTTCATTTGATCACAATGGCTATATTGAAATGCATAATCTTGTGAGGGACATGGGCGTTGAAATTGCTAGACAACAGTCATTTTCTAATCCTAAAGGCTCTGTTCGACTGCGAAGTCATAGGGACATCTATGATTTTTTCATTTGTAACAAGAGAACGCGGCGTTCAGAAGAGAAGCGGATAATGATAGTGAGGAGAAGATGA 1776 0.3666 MDATIVLMLIEAVLILLAIAISKAIRLISPLHATHPISVDDSGKDVVDDPIPTVSSPSHIIDAPLATKYDVFLNFRGEDTHDNFTSYLYEALCDANIHTFMDHKLHKGDNISPILLETIEESEISLIIFSKDYASSTWCMDELVHIMKCRDKYKRDVIPIFYHVDPSNIRKQEGSFGDGFAKLKQRFKHNEEKVQEWKKALNQSTNLSGWDSKNFRTEPKLIKKIVKDILSKLNSKPSFHLEGLVGISHQIQKIEELLDEARIVGIWGMGGMGKTTLARAVFHKLKAQFNALSFVENVRKQQGIIGFDRLQQECLKELIKDEDINVFDIKSTFVRNRLRRKKILLILDDVDNSIPAEDLTKVYHWFGEGSRIILTSRDMQVLQNAFAFSIYSVPRLDFHDALHLFSLKAFKQNEPFKSYVELSKSVVDYCQGNPFALVKLGSFLQGRGKEEWESSLEKIEETPPNYIIDVLKLSFDGLDRDQKNMFLDIAFFIKEKVDVSLDLIGQLYGSSVDIDVNVLKDRSLTSFDHNGYIEMHNLVRDMGVEIARQQSFSNPKGSVRLRSHRDIYDFFICNKRTRRSEEKRIMIVRRR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral927g00007 591 SMART till_3 68 207 IPR000157 GO:0007165
Pral927g00007 591 Gene3D - 396 479 IPR042197 -
Pral927g00007 591 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 570 IPR044974 GO:0006952
Pral927g00007 591 SUPERFAMILY "Winged helix" DNA-binding domain 467 566 IPR036390 -
Pral927g00007 591 Pfam TIR domain 68 238 IPR000157 GO:0007165
Pral927g00007 591 ProSiteProfiles TIR domain profile. 67 233 IPR000157 GO:0007165
Pral927g00007 591 FunFam Disease resistance protein (TIR-NBS-LRR class) 65 235 - -
Pral927g00007 591 Coils Coil 180 200 - -
Pral927g00007 591 Gene3D - 240 387 IPR027417 -
Pral927g00007 591 SUPERFAMILY Toll/Interleukin receptor TIR domain 67 210 IPR035897 -
Pral927g00007 591 Pfam NB-ARC domain 252 462 IPR002182 GO:0043531
Pral927g00007 591 PRINTS Disease resistance protein signature 337 351 - -
Pral927g00007 591 PRINTS Disease resistance protein signature 263 278 - -
Pral927g00007 591 PRINTS Disease resistance protein signature 430 444 - -
Pral927g00007 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 489 IPR027417 -
Pral927g00007 591 Gene3D - 66 239 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral927g00007 Pral-Chr927 62219 66143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral927g00007 43 572 WRKY Transcription Factor Family AT4G12020 28.704 1.34e-53 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral927g00007 - - pcin:129286024 719.153