Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral927g00004 ATGGATGCAACCATTGCTTTAACGCTCATAGAAGGTTTGTTGATCTTATTGGCTATAGCAACTAATAAAGCTCTCAGATTTCTCTGTCCTTCCCTTCACGTTGTTCATCAGATCAGTTGTAAAGGCGAAGATGCTTCAGTTTCAACAGTTTCTTCTTCTGATCGTATTGCTGTTGGTGATCCTCCTCCTGCAACCAAGTATGATGTGTTCCTTAGTTTTAGAGGCGAAGACACTCGCAAAAATTTCGCGAGTTATCTTTATGAAGCACTTTGTAAAGCAAACATTCACTCTTTTATGGATCACAAACTCCACAAAGGAGATGATATCTCACCCATTCTTCTAAGAGCCATACAGGAATCAGAGATTTCTGTGATTATTTTCTCTGCTGATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTGTTCACATATTAGAGTGTAAGAAAAAATTTGGAAGGATTGTGGTACCTATTTTCTACAAAGTTGACCCATCAAATGTTAGCAAACAAAGTGGGAGCTTTGGATATGGATTTGCTAAGCTGAAGCAAAGATTTAAAGACAACCCAGAGAGACTACATAAGTGGGAAAATGCTTTGATCCAGTCAACAAGCCTCTCTTCTAGATGGGATTCCACGAATATCAGGCCTGAGACCAAATTCATTAAAGAAATTGTGGAAGATATCTTGAGCAAACTGAACTACTATACATCATCAACATCATCATGTCATGTTGAAGGACTCGTGGGCATTAATCATCAAATTGAGAAAATAGAAGAACTCTTGATTGATGCTCGGATACTAGGAATATGGGGCACAGGTGGTATAGGTAAAACTACCCTTGCCAAAGCTTTGTTTGGCAAATTGAAATCACAATTTGAAGCTTCCTCATTTGTTGGAAATGTAAGAGAACAACTTGCAAGAAATGGAGTTGAAAAATTACAAGAACAATGCCTTAAAGAATTATTAAAAGATGAGGGCCTTCACATCTACAACATGAGATCCACTTTTGTGAAACATAGGCTTCAACGCAAGAAAATCCTTCTGATACTTGATGATGTGGACAATTTATTAACAGCAGAAGATTTAACCAAGTTGTGTGATTGGTTTGGAGAAGGAAGTAGAATTATTGTTACCTCCAGAGACATGCAAATTCTTAAGAATTCTTCTGCAAGTACAACATATCATGTTAAGGGATTAGAGTTCAATGATGCTCTAAATCTCTTCAGTTTGAAAGCATTTAAGCAAAATGAGCCATTTAAAGGCTATTTGGGGTTATCAAAGTTTGTTGTGAGTCATTATTGTCAAGGAAATCCATTAGCTCTTGTAGTGTTGGGTTGTTTTCTTTATCGAAAAACAAAAGAAGTGTGGGAAAGTGCATTGGAAAAACTAAAACAAGCCCCACATAAAGACATTTTTAGTGTTCTAAAATTGAGTTTTGATGGACTTGATGAGATGCAGAAGAATGTATTTCTTGACCTTACAATTTTCTTGAAGGGAGGAGCATGGAGGGTTTCTCTAGATTGTTTAAGAAGCTTATATGGTTCTTCTGCATATATTGACATATGTGTGCTTAAAGAGAGATCCCTCATTTTAGTGAATGAAAATGGTGATATTGAGATGCATGCTCTTCTAATGGACATGGGGCTTGAAATTTCTAGGCAACAATTCATATCTAACCCAGAAAAACCCATTCGACTATGGAGGCACGAGGATATTTATCGTTTTTTCAACAATGACAAGGCGACGGTGGAGGCAGTTCGATGCGTGTCATTAGACATGAGCAAGATGAAAATGATTAAATGGAGGTCTAGTGATTTTCAAAAAATGCACAATTTAATATTCCTTAGAATTTACAAGTCAGATCAAAGGAGAAAGCCTTCAAAGCTGAACCTTTTTGGACATTTGGATTATCTCCCAGAAGAATTAAGGTTTTTTAGGTGGGAAGAATATCCACTACCATATGTACCATTGCATTTCTGTGCCGAGAATCTTGTTATCCTTGGAACACCTAATAGTAATATCCGACAACTGGGCAATGGGACTCAGCATTTTCCAAATCTAAGGAGAATGGATGTACAGTATTCAAAAGATCTCACTGCTATCCCAGATCTATGCCATACCCCTAAGATTGAAAAGCTGTGTCTTGATGGTTGTGTGAGTTTGGCTCATATCCATTATTCTTCAGATGTCTCGGGAAGGAATGTGACCCTATATATACAAGATAGTAGGCCATTGGAGATGGACATTGAGGGCATTTTTAGAATGGAAGGGCTTAGTCCATCAGGGTTTGAGATTGTTCGCAGTTATAGTTTGGACGGTTGCGATAATTTGTCAATGAAGGTCGAGGTACGTGGCAAGATCATGTCGGGTGTTGGATTTAAACACGTGGAAGAGAATGCAGAATTGAGACAGAGATTGGAGTGTTTACTTCCATATGTGAAGAGAGTTGAATGGTCGGAGAGTGCAATTGATGATTTCAACCAACATTATAACTACCATCTGCATTATACCGATCCTTTTTACTCCCTTGCCACAGATAATGACCTACCACTTACAACACAAGTGGCGGCTATGGCGACAACGATGGAGGAAGCTGCAGATCCCGGTGCCGCCATTTTTGCTATCTTTGTGAGCTATTTCTTCTGCTTCCTCCAGATCCAGTCGTCTGCTTTTACTCGTATCTAA 2685 0.3844 MDATIALTLIEGLLILLAIATNKALRFLCPSLHVVHQISCKGEDASVSTVSSSDRIAVGDPPPATKYDVFLSFRGEDTRKNFASYLYEALCKANIHSFMDHKLHKGDDISPILLRAIQESEISVIIFSADYASSTWCLDELVHILECKKKFGRIVVPIFYKVDPSNVSKQSGSFGYGFAKLKQRFKDNPERLHKWENALIQSTSLSSRWDSTNIRPETKFIKEIVEDILSKLNYYTSSTSSCHVEGLVGINHQIEKIEELLIDARILGIWGTGGIGKTTLAKALFGKLKSQFEASSFVGNVREQLARNGVEKLQEQCLKELLKDEGLHIYNMRSTFVKHRLQRKKILLILDDVDNLLTAEDLTKLCDWFGEGSRIIVTSRDMQILKNSSASTTYHVKGLEFNDALNLFSLKAFKQNEPFKGYLGLSKFVVSHYCQGNPLALVVLGCFLYRKTKEVWESALEKLKQAPHKDIFSVLKLSFDGLDEMQKNVFLDLTIFLKGGAWRVSLDCLRSLYGSSAYIDICVLKERSLILVNENGDIEMHALLMDMGLEISRQQFISNPEKPIRLWRHEDIYRFFNNDKATVEAVRCVSLDMSKMKMIKWRSSDFQKMHNLIFLRIYKSDQRRKPSKLNLFGHLDYLPEELRFFRWEEYPLPYVPLHFCAENLVILGTPNSNIRQLGNGTQHFPNLRRMDVQYSKDLTAIPDLCHTPKIEKLCLDGCVSLAHIHYSSDVSGRNVTLYIQDSRPLEMDIEGIFRMEGLSPSGFEIVRSYSLDGCDNLSMKVEVRGKIMSGVGFKHVEENAELRQRLECLLPYVKRVEWSESAIDDFNQHYNYHLHYTDPFYSLATDNDLPLTTQVAAMATTMEEAADPGAAIFAIFVSYFFCFLQIQSSAFTRI 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral927g00004 894 ProSiteProfiles TIR domain profile. 65 232 IPR000157 GO:0007165
Pral927g00004 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 493 IPR027417 -
Pral927g00004 894 SUPERFAMILY L domain-like 585 742 - -
Pral927g00004 894 Gene3D - 238 395 IPR027417 -
Pral927g00004 894 SMART till_3 66 205 IPR000157 GO:0007165
Pral927g00004 894 PRINTS Disease resistance protein signature 434 448 - -
Pral927g00004 894 PRINTS Disease resistance protein signature 340 354 - -
Pral927g00004 894 PRINTS Disease resistance protein signature 682 698 - -
Pral927g00004 894 PRINTS Disease resistance protein signature 266 281 - -
Pral927g00004 894 Pfam NB-ARC domain 253 471 IPR002182 GO:0043531
Pral927g00004 894 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 201 IPR035897 -
Pral927g00004 894 SUPERFAMILY "Winged helix" DNA-binding domain 470 575 IPR036390 -
Pral927g00004 894 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 777 IPR044974 GO:0006952
Pral927g00004 894 Gene3D Ribonuclease Inhibitor 584 779 IPR032675 -
Pral927g00004 894 FunFam Disease resistance protein (TIR-NBS-LRR class) 63 234 - -
Pral927g00004 894 Pfam TIR domain 66 242 IPR000157 GO:0007165
Pral927g00004 894 Gene3D - 64 237 IPR035897 -
Pral927g00004 894 Gene3D - 399 483 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral927g00004 Pral-Chr927 47997 62361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral927g00004 55 718 WRKY Transcription Factor Family AT4G12020 29.651 3.00e-71 256